asd-4 (Neurospora crassa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 NCU15829 T196905_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GZF3
M00051_2.00
Saccharomyces cerevisiae
HGATAAGN

NCTTATCD
PBM
Badis et al.(2008)
GZF3_2167
0.856 0.829
GZF3
M01548_2.00
Saccharomyces cerevisiae
NNGATWNN

NNWATCNN
PBM
Zhu et al.(2009)
Gzf3
0.856 0.829
GZF3
M07480_2.00
Saccharomyces cerevisiae
HGATAASN

NSTTATCD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1
0.856 0.829
GZF3
M08562_2.00
Saccharomyces cerevisiae
GATAAG

CTTATC
Misc
DeBoer et al.(2011)
YJL110C_593
0.856 0.829
DAL80
M00052_2.00
Saccharomyces cerevisiae
NNNNTANNNN

NNNNTANNNN
PBM
Badis et al.(2008)
DAL80_2083
0.851 0.829
DAL80
M07481_2.00
Saccharomyces cerevisiae
YGATAAG

CTTATCR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1
0.851 0.829
DAL80
M08564_2.00
Saccharomyces cerevisiae
VNMGATAD

HTATCKNB
Misc
DeBoer et al.(2011)
YKR034W_1355
0.851 0.829
GAT1
M00049_2.00
Saccharomyces cerevisiae
NNNNGATANN

NNTATCNNNN
PBM
Badis et al.(2008)
GAT1_2166
0.842 0.743
GAT1
M01546_2.00
Saccharomyces cerevisiae
NNGATWNN

NNWATCNN
PBM
Zhu et al.(2009)
Gat1
0.842 0.743
GAT1
M07478_2.00
Saccharomyces cerevisiae
NHGATAAG

CTTATCDN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1
0.842 0.743
GAT1
M08560_2.00
Saccharomyces cerevisiae
WKTGATWW

WWATCAMW
Misc
DeBoer et al.(2011)
YFL021W_962
0.842 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NCU15829 GATA 122 156

Links

Other GATA family TFs
Other Neurospora crassa TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA023869 Oryza indica BGIOSGA023869 N 0.000
BRADI1G61110 Brachypodium distachyon BRADI1G61110 N 0.000
GRMZM2G017145 Zea mays GRMZM2G017145 N 0.000
GRMZM2G350312 Zea mays GRMZM2G350312 N 0.000
LPERR07G20030 Leersia perrieri LPERR07G20030 N 0.000
OB07G28610 Oryza brachyantha OB07G28610 N 0.000
OBART07G23020 Oryza barthii OBART07G23020 N 0.000
OGLUM07G23080 Oryza glumaepatula OGLUM07G23080 N 0.000
OLONG_009586 Oryza longistaminata OLONG_009586 N 0.000
OMERI07G19420 Oryza meridionalis OMERI07G19420 N 0.000
ONIVA07G22640 Oryza nivara ONIVA07G22640 N 0.000
OPUNC07G21640 Oryza punctata OPUNC07G21640 N 0.000
OPUNC07G21720 Oryza punctata OPUNC07G21720 N 0.000
ORGLA07G0180200 Oryza glaberrima ORGLA07G0180200 N 0.000
ORUFI07G24160 Oryza rufipogon ORUFI07G24160 N 0.000
BHLH062 Oryza sativa OS07G0628500 N 0.000
Pavir.Ba00364 Panicum virgatum Pavir.Ba00364 N 0.000
Pavir.Bb03409 Panicum virgatum Pavir.Bb03409 N 0.000
Pavir.Ia03149 Panicum virgatum Pavir.Ia03149 N 0.000
Pavir.J37675 Panicum virgatum Pavir.J37675 N 0.000
PDK_20s1715301g001 Phoenix dactylifera PDK_20s1715301g001 N 0.000
Sb02g040140 Sorghum bicolor Sb02g040140 N 0.000
Si037016m.g Setaria italica Si037016m.g N 0.000