PK21934.1 (Cannabis sativa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 PK21934.1 T196918_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG

CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.822 0.743
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN

NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.802 0.743
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS

SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.802 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK21934.1 GATA 54 88

Links

Other GATA family TFs
Other Cannabis sativa TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000309902 Malus domestica MDP0000309902 I 0.861
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.851
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.851
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.851
TCM_026732 Theobroma cacao TCM_026732 I 0.851
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.851
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.851
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.851
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.851
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.851
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.851
Lus10031464.g Linum usitatissimum Lus10031464.g I 0.847
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.842
OMERI03G36600 Oryza meridionalis OMERI03G36600 I 0.840
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I 0.840
OLONG_023900 Oryza longistaminata OLONG_023900 I 0.840
LPERR03G33900 Leersia perrieri LPERR03G33900 I 0.840
ONIVA03G41600 Oryza nivara ONIVA03G41600 I 0.840
OBART03G39750 Oryza barthii OBART03G39750 I 0.840
OS03G0831200 Oryza sativa OS03G0831200 I 0.840
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.840
PGSC0003DMG400024783 Solanum tuberosum PGSC0003DMG400024783 I 0.840
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I 0.840
OPUNC03G36910 Oryza punctata OPUNC03G36910 I 0.840
OPUNC03G36900 Oryza punctata OPUNC03G36900 I 0.840
Solyc01g100220.2 Solanum lycopersicum Solyc01g100220.2 I 0.840
BGIOSGA013869 Oryza indica BGIOSGA013869 I 0.840
BGIOSGA013867 Oryza indica BGIOSGA013867 I 0.840
Cla009422 Citrullus lanatus Cla009422 I 0.838
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.838
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.838
29889.m003248 Ricinus communis 29889.m003248 I 0.838
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.838
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.838
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.838
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.838
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.838
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.838
PK18820.1 Cannabis sativa PK18820.1 I 0.838
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.838
TCM_004753 Theobroma cacao TCM_004753 I 0.838
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.838
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.838
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.838
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.838
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.833
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.833
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.833
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.833
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.833
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.833
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.833
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.833
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.833
Bo00847s050 Brassica oleracea Bo00847s050 I 0.833
mgf003937m Mimulus guttatus mgf003937m I 0.833
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.833
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.833
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.833
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.833
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.833
TCM_021303 Theobroma cacao TCM_021303 I 0.833
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.833
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.833
Cla022104 Citrullus lanatus Cla022104 I 0.833
Ca_02992 Cicer arietinum Ca_02992 I 0.833
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.833
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.833
Pm008287 Prunus mume Pm008287 I 0.833
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.833
mgf022078m Mimulus guttatus mgf022078m I 0.826
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.825
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.825
30128.m008883 Ricinus communis 30128.m008883 N 0.825
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N 0.825
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.825
Solyc05g054400.2 Solanum lycopersicum Solyc05g054400.2 I 0.823
PGSC0003DMG400023434 Solanum tuberosum PGSC0003DMG400023434 I 0.823
GATA16 Arabidopsis thaliana AT5G49300 D 0.822
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.821
Bo1g055120 Brassica oleracea Bo1g055120 I 0.819
Bo3g068560 Brassica oleracea Bo3g068560 I 0.819
Bostr.28625s0006 Boechera stricta Bostr.28625s0006 I 0.819
Bo1g122970 Brassica oleracea Bo1g122970 I 0.819
Bo5g123610 Brassica oleracea Bo5g123610 I 0.819
Cagra.5497s0020 Capsella grandiflora Cagra.5497s0020 I 0.819
AT4G16141 Arabidopsis thaliana AT4G16141 I 0.819
GATA17 Arabidopsis thaliana AT3G16870 I 0.819
Carubv10005860m.g Capsella rubella Carubv10005860m.g I 0.819
Carubv10014665m.g Capsella rubella Carubv10014665m.g I 0.819
GATA17 Arabidopsis lyrata fgenesh2_kg.3__1856__AT3G16870.1 I 0.819
fgenesh1_pm.C_scaffold_7002128 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7002128 I 0.819
Bo7g104200 Brassica oleracea Bo7g104200 I 0.819
Bra033533 Brassica rapa Bra033533 I 0.819
Thhalv10021612m.g Eutrema salsugineum Thhalv10021612m.g I 0.819
Thhalv10026300m.g Eutrema salsugineum Thhalv10026300m.g I 0.819
Bra012742 Brassica rapa Bra012742 I 0.819
Bra022184 Brassica rapa Bra022184 I 0.819
Cagra.0053s0014 Capsella grandiflora Cagra.0053s0014 I 0.819
Bostr.30275s0055 Boechera stricta Bostr.30275s0055 I 0.819
Bra021209 Brassica rapa Bra021209 I 0.819
GATA22 Arabidopsis thaliana AT4G26150 N 0.814
Cla021191 Citrullus lanatus Cla021191 N 0.814
Pm027164 Prunus mume Pm027164 N 0.814
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.814
MDP0000190038 Malus domestica MDP0000190038 N 0.814
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.814
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.814
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.814
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.814
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.814
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.814
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.814
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.814
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.814
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.814
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.814
29794.m003323 Ricinus communis 29794.m003323 N 0.814
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.814
29912.m005322 Ricinus communis 29912.m005322 N 0.814
mgf008387m Mimulus guttatus mgf008387m N 0.814
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.814
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.814
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.814
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.814
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.814
mgf025842m Mimulus guttatus mgf025842m N 0.814
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.814
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.814
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.814
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.814
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.814
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.814
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.814
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.814
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.814
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.814
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.814
GATA21 Arabidopsis thaliana AT5G56860 N 0.814
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.814
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.814
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.814
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.814
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.814
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.814
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.814
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.814
Si006733m.g Setaria italica Si006733m.g N 0.814
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.814
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.814
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.814
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.814
Bo7g110740 Brassica oleracea Bo7g110740 N 0.814
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.814
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.814
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.814
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.814
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.814
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.814
OBART01G45830 Oryza barthii OBART01G45830 I 0.814
OBART02G08990 Oryza barthii OBART02G08990 N 0.814
OBART06G19060 Oryza barthii OBART06G19060 N 0.814
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.814
OB06G26630 Oryza brachyantha OB06G26630 N 0.814
OB02G18010 Oryza brachyantha OB02G18010 N 0.814
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.814
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.814
OB01G55040 Oryza brachyantha OB01G55040 I 0.814
GSMUA_Achr1G14780_001 Musa acuminata GSMUA_Achr1G14780_001 N 0.814
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.814
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.814
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.814
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.814
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.814
Bo9g127360 Brassica oleracea Bo9g127360 N 0.814
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.814
Bra019118 Brassica rapa Bra019118 N 0.814
Bra026461 Brassica rapa Bra026461 N 0.814
Bra035633 Brassica rapa Bra035633 N 0.814
PK07593.1 Cannabis sativa PK07593.1 N 0.814
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.814
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.814
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.814
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.814
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.814
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.814
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.814
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.814
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.814
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.814
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.814
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.814
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.814
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.814
Si002983m.g Setaria italica Si002983m.g I 0.814
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.814
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.814
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.814
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.814
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.814
MDP0000131803 Malus domestica MDP0000131803 N 0.814
Si019058m.g Setaria italica Si019058m.g N 0.814
TCM_037666 Theobroma cacao TCM_037666 N 0.814
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.814
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.814
Bra002788 Brassica rapa Bra002788 N 0.814
TCM_037285 Theobroma cacao TCM_037285 N 0.814
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.814
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.814
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.814
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.814
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.814
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.814
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.814
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.814
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.814
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.814
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.814
Bo2g033970 Brassica oleracea Bo2g033970 N 0.814
OLONG_011157 Oryza longistaminata OLONG_011157 I 0.814
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.814
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.814
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.814
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.814
OS06G0571800 Oryza sativa OS06G0571800 N 0.814
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.814
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.814
OS02G0220400 Oryza sativa OS02G0220400 N 0.814
OS01G0976800 Oryza sativa OS01G0976800 I 0.814
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.814
Bo1g042950 Brassica oleracea Bo1g042950 N 0.814
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.814
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.814
Solyc01g060490.2 Solanum lycopersicum Solyc01g060490.2 N 0.812
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.811
Pm003128 Prunus mume Pm003128 I 0.811
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.810
Pavir.J12379 Panicum virgatum Pavir.J12379 I 0.810
Pavir.J03766 Panicum virgatum Pavir.J03766 I 0.810
Traes_5BL_F258582BB Triticum aestivum Traes_5BL_F258582BB I 0.810
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.810
MDP0000739900 Malus domestica MDP0000739900 N 0.810
Si037892m.g Setaria italica Si037892m.g I 0.810
PGSC0003DMG400031828 Solanum tuberosum PGSC0003DMG400031828 N 0.810
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.810
F775_43556 Aegilops tauschii F775_43556 I 0.810
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.810
GRMZM2G114775 Zea mays GRMZM2G114775 I 0.810
Solyc09g075610.2 Solanum lycopersicum Solyc09g075610.2 N 0.810
Sb01g002270 Sorghum bicolor Sb01g002270 I 0.810
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.810
Pm005502 Prunus mume Pm005502 N 0.810
MDP0000237740 Malus domestica MDP0000237740 N 0.810
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.810
GSMUA_Achr7G03800_001 Musa acuminata GSMUA_Achr7G03800_001 N 0.809
AMTR_s00025p00250380 Amborella trichopoda AMTR_s00025p00250380 N 0.809
Bra020650 Brassica rapa Bra020650 I 0.807
Lus10020684.g Linum usitatissimum Lus10020684.g N 0.807
CME102C Cyanidioschyzon merolae CME102C N 0.804
Bra037421 Brassica rapa Bra037421 I 0.802
Bo7g092660 Brassica oleracea Bo7g092660 I 0.802
GATA15 Arabidopsis thaliana AT3G06740 D 0.802
GATA15 Arabidopsis lyrata fgenesh2_kg.3__690__AT3G06740.1 I 0.802
Thhalv10021708m.g Eutrema salsugineum Thhalv10021708m.g I 0.802
Carubv10014841m.g Capsella rubella Carubv10014841m.g I 0.802
Cagra.0133s0025 Capsella grandiflora Cagra.0133s0025 I 0.802
Bostr.22252s0362 Boechera stricta Bostr.22252s0362 I 0.802