SMU15039025 (Schmidtea mediterranea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SMU15039025 T196949_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gata6
M00165_2.00 		Mus musculus
NHGATARN
NYTATCDN		 PBM
Badis et al.(2009)
Gata6_3769 		0.803 0.609
GATA6
M04877_2.00 		Homo sapiens
HGATAABVATCD
HGATBVTTATCD		 SELEX
Yin et al.(2017)
GATA6_eDBD_HT-SELEX 		0.803 0.609
GATA6
M08124_2.00 		Homo sapiens
NNNAGATAAGRNN
NNYCTTATCTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1104.1 		0.803 0.609
GATA6
M09118_2.00 		Homo sapiens
NVWGATAAGRNNN
NNNYCTTATCWBN		 Misc
Kulakovskiy et al.(2013)
GATA6_HUMAN.H11MO.0.A 		0.803 0.609
Gata6
M09120_2.00 		Mus musculus
NVWGATAAGV
BCTTATCWBN		 Misc
Kulakovskiy et al.(2013)
GATA6_MOUSE.H11MO.0.A 		0.803 0.609
GATA6
M10592_2.00 		Homo sapiens
NNHGATWDNN
NNHWATCDNN		 Transfac
Matys et al.(2006)
V$GATA6_01 		0.803 0.609
GATA6
M10593_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GATA6_Q5 		0.803 0.609
GATA6
M04878_2.00 		Homo sapiens
HGATAABRATCW
WGATYVTTATCD		 SELEX
Yin et al.(2017)
GATA6_eDBD_Methyl-HT-SELEX 		0.803 0.609
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15039025 GATA 277 310
SMU15039025 GATA 347 381

Links

Other GATA family TFs
Other Schmidtea mediterranea TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE008305 Anopheles atroparvus AATE008305 I 0.807
CBG20056 Caenorhabditis briggsae CBG20056 I 0.807
CRE13557 Caenorhabditis remanei CRE13557 I 0.807
PPAI010312 Phlebotomus papatasi PPAI010312 I 0.807
CBN00985 Caenorhabditis brenneri CBN00985 I 0.807
CBN04531 Caenorhabditis brenneri CBN04531 I 0.807
e_gw.714.25.1 Branchiostoma floridae e_gw.714.25.1 I 0.805
CLEC001713 Cimex lectularius CLEC001713 I 0.805
GATA6 Sus scrofa ENSSSCG00000003702 I 0.803
ENSSTOG00000020228 Ictidomys tridecemlineatus ENSSTOG00000020228 I 0.803
GATA6 Tursiops truncatus ENSTTRG00000013349 I 0.803
ENSSHAG00000006798 Sarcophilus harrisii ENSSHAG00000006798 I 0.803
Gata6 Rattus norvegicus ENSRNOG00000023433 I 0.803
ENSPVAG00000004151 Pteropus vampyrus ENSPVAG00000004151 I 0.803
gata6.L Xenopus laevis XB-GENE-865113 I 0.803
KGM_02427 Danaus plexippus KGM_02427 I 0.803
LotgiG129788 Lottia gigantea LotgiG129788 I 0.803
gata1 Xenopus tropicalis XB-GENE-484636 I 0.803
gata6 Xenopus tropicalis XB-GENE-485063 I 0.803
GATA6 Pan troglodytes ENSPTRG00000009913 I 0.803
gata1.L Xenopus laevis XB-GENE-865107 I 0.803
LotgiG69716 Lottia gigantea LotgiG69716 I 0.803
tetur11g02300 Tetranychus urticae tetur11g02300 I 0.803
gata1.S Xenopus laevis XB-GENE-6252666 I 0.803
ENSPANG00000007820 Papio anubis ENSPANG00000007820 I 0.803
ENSCSAG00000017663 Chlorocebus sabaeus ENSCSAG00000017663 I 0.803
GATA6 Dasypus novemcinctus ENSDNOG00000040060 I 0.803
GATA6 Echinops telfairi ENSETEG00000005525 I 0.803
GATA6 Cavia porcellus ENSCPOG00000026126 I 0.803
GATA6 Callithrix jacchus ENSCJAG00000020543 I 0.803
CGI_10016670 Crassostrea gigas CGI_10016670 I 0.803
ENSBTAG00000005734 Bos taurus ENSBTAG00000005734 I 0.803
ENSCAFG00000023151 Canis familiaris ENSCAFG00000023151 I 0.803
GATA6 Homo sapiens ENSG00000141448 D 0.803
GATA6 Gorilla gorilla ENSGGOG00000024673 I 0.803
ENSNLEG00000006806 Nomascus leucogenys ENSNLEG00000006806 I 0.803
ENSOCUG00000025943 Oryctolagus cuniculus ENSOCUG00000025943 I 0.803
GATA6 Otolemur garnettii ENSOGAG00000034042 I 0.803
Gata6 Mus musculus ENSMUSG00000005836 D 0.803
ENSMPUG00000005621 Mustela putorius furo ENSMPUG00000005621 I 0.803
ENSLACG00000002547 Latimeria chalumnae ENSLACG00000002547 I 0.803
ENSPPYG00000009057 Pongo abelii ENSPPYG00000009057 I 0.803
ENSLAFG00000007931 Loxodonta africana ENSLAFG00000007931 I 0.803
GATA6 Monodelphis domestica ENSMODG00000021492 I 0.803
LLOJ001304 Lutzomyia longipalpis LLOJ001304 I 0.802