gata4.L (Xenopus laevis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 XB-GENE-487462 T196973_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gata4
M00799_2.00
Mus musculus
NHGATWDNN

NNHWATCDN
PBM
Weirauch et al.(2013)
pTH1049
0.867 0.986
GATA4
M03066_2.00
Homo sapiens
HGATAAVV

BBTTATCD
SELEX
Jolma et al.(2013)
GATA4_1
0.867 0.986
GATA4
M04875_2.00
Homo sapiens
NHGATAASVN

NBSTTATCDN
SELEX
Yin et al.(2017)
GATA4_eDBD_HT-SELEX
0.867 0.986
Gata4
M08126_2.00
Mus musculus
NDVAGATAAGR

YCTTATCTBHN
ChIP-seq
Mathelier et al.(2014)
MA0482.1
0.867 0.986
GATA4
M09117_2.00
Homo sapiens
NVWGATAAGR

YCTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA4_HUMAN.H11MO.0.A
0.867 0.986
Gata4
M09123_2.00
Mus musculus
NVWGATAAGR

YCTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA4_MOUSE.H11MO.0.A
0.867 0.986
Gata4
M09556_2.00
Mus musculus
NNWGATAASV

BSTTATCWNN
Misc
Heinz et al.(2010)
Heart-Gata4_GSE35151
0.867 0.986
GATA4
M10590_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA4_Q3
0.867 0.986
GATA4
M10591_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA4_Q5_01
0.867 0.986
GATA4
M04876_2.00
Homo sapiens
NWGATAASVN

NBSTTATCWN
SELEX
Yin et al.(2017)
GATA4_eDBD_Methyl-HT-SELEX
0.867 0.986
GATA5
M03065_2.00
Homo sapiens
HGATAAVV

BBTTATCD
SELEX
Jolma et al.(2013)
GATA5_1
0.864 0.929
GATA5
M04867_2.00
Homo sapiens
NHGATAASVN

NBSTTATCDN
SELEX
Yin et al.(2017)
GATA5_eDBD_HT-SELEX_1
0.864 0.929
GATA5
M04868_2.00
Homo sapiens
HGATAASRATCD

HGATYSTTATCD
SELEX
Yin et al.(2017)
GATA5_eDBD_HT-SELEX_2
0.864 0.929
GATA5
M04871_2.00
Homo sapiens
NWGATAASVN

NBSTTATCWN
SELEX
Yin et al.(2017)
GATA5_FL_HT-SELEX_1
0.864 0.929
GATA5
M04872_2.00
Homo sapiens
WGATAASRATCD

HGATYSTTATCW
SELEX
Yin et al.(2017)
GATA5_FL_HT-SELEX_2
0.864 0.929
GATA5
M04869_2.00
Homo sapiens
NWGATAASVN

NBSTTATCWN
SELEX
Yin et al.(2017)
GATA5_eDBD_Methyl-HT-SELEX_1
0.864 0.929
GATA5
M04870_2.00
Homo sapiens
WGATAAVRATCT

AGATYBTTATCW
SELEX
Yin et al.(2017)
GATA5_eDBD_Methyl-HT-SELEX_2
0.864 0.929
GATA5
M04873_2.00
Homo sapiens
NWGATAASRN

NYSTTATCWN
SELEX
Yin et al.(2017)
GATA5_FL_Methyl-HT-SELEX_1
0.864 0.929
GATA5
M04874_2.00
Homo sapiens
WGATAANRATCW

WGATYNTTATCW
SELEX
Yin et al.(2017)
GATA5_FL_Methyl-HT-SELEX_2
0.864 0.929
Gata5
M00167_2.00
Mus musculus
NNHGAWWNN

NNWWTCDNN
PBM
Badis et al.(2009)
Gata5_3768
0.862 0.929
Gata5
M10598_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA5_Q4
0.862 0.929
Gata6
M00165_2.00
Mus musculus
NHGATARN

NYTATCDN
PBM
Badis et al.(2009)
Gata6_3769
0.855 0.914
GATA6
M04877_2.00
Homo sapiens
HGATAABVATCD

HGATBVTTATCD
SELEX
Yin et al.(2017)
GATA6_eDBD_HT-SELEX
0.855 0.914
GATA6
M08124_2.00
Homo sapiens
NNNAGATAAGRNN

NNYCTTATCTNNN
ChIP-seq
Mathelier et al.(2014)
MA1104.1
0.855 0.914
GATA6
M09118_2.00
Homo sapiens
NVWGATAAGRNNN

NNNYCTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA6_HUMAN.H11MO.0.A
0.855 0.914
Gata6
M09120_2.00
Mus musculus
NVWGATAAGV

BCTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA6_MOUSE.H11MO.0.A
0.855 0.914
GATA6
M10592_2.00
Homo sapiens
NNHGATWDNN

NNHWATCDNN
Transfac
Matys et al.(2006)
V$GATA6_01
0.855 0.914
GATA6
M10593_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA6_Q5
0.855 0.914
GATA6
M04878_2.00
Homo sapiens
HGATAABRATCW

WGATYVTTATCD
SELEX
Yin et al.(2017)
GATA6_eDBD_Methyl-HT-SELEX
0.855 0.914
Gata3
M00166_2.00
Mus musculus
NNNHGATHNN

NNDATCDNNN
PBM
Badis et al.(2009)
Gata3_1024
0.851 0.871
GATA3
M03063_2.00
Homo sapiens
HGATARVV

BBYTATCD
SELEX
Jolma et al.(2013)
GATA3_1
0.851 0.871
GATA3
M03064_2.00
Homo sapiens
HGATAAVV

BBTTATCD
SELEX
Jolma et al.(2013)
GATA3_2
0.851 0.871
GATA2
M04879_2.00
Homo sapiens
VHGATAHSV

BSDTATCDB
SELEX
Yin et al.(2017)
GATA2_eDBD_HT-SELEX
0.851 0.871
GATA3
M04863_2.00
Homo sapiens
HGATAASRATCW

WGATYSTTATCD
SELEX
Yin et al.(2017)
GATA3_FL_HT-SELEX_1
0.851 0.871
GATA3
M04864_2.00
Homo sapiens
HGATAASATCD

HGATSTTATCD
SELEX
Yin et al.(2017)
GATA3_FL_HT-SELEX_2
0.851 0.871
Gata3
M05867_2.00
Mus musculus
GATAAN

NTTATC
SMiLE-seq
Isakova et al.(2017)
GATA3
0.851 0.871
GATA2
M08125_2.00
Homo sapiens
NNAGATAAGNN

NNCTTATCTNN
ChIP-seq
Mathelier et al.(2014)
MA0036.3
0.851 0.871
GATA2
M07966_2.00
Homo sapiens
NVWGATAAVVN

NBBTTATCWBN
ChIP-seq
Gerstein et al.(2012)
HUVEC_GATA2_UCD
0.851 0.871
GATA2
M07967_2.00
Homo sapiens
BKNNNNNNNSWGATAASV

BSTTATCWSNNNNNNNMV
ChIP-seq
Gerstein et al.(2012)
K562b_GATA2_UCD
0.851 0.871
GATA2
M07968_2.00
Homo sapiens
NNKNNNNNNNVWGATAAV

BTTATCWBNNNNNNNMNN
ChIP-seq
Gerstein et al.(2012)
K562_GATA2_HudsonAlpha
0.851 0.871
GATA2
M07969_2.00
Homo sapiens
NVWGATAAVV

BBTTATCWBN
ChIP-seq
Gerstein et al.(2012)
K562_GATA2_UChicago
0.851 0.871
GATA2
M07970_2.00
Homo sapiens
VWGATARVVN

NBBYTATCWB
ChIP-seq
Gerstein et al.(2012)
SH-SY5Y_GATA2_UCD
0.851 0.871
GATA3
M07965_2.00
Homo sapiens
NWGATWRNVATCWSN

NSWGATBNYWATCWN
ChIP-seq
Gerstein et al.(2012)
T-47D_GATA3_HudsonAlpha
0.851 0.871
GATA2
M09119_2.00
Homo sapiens
NKKNNNNNNDVAGATAASV

BSTTATCTBHNNNNNNMMN
Misc
Kulakovskiy et al.(2013)
GATA2_HUMAN.H11MO.0.A
0.851 0.871
GATA3
M09116_2.00
Homo sapiens
DVAGATAAVRD

HYBTTATCTBH
Misc
Kulakovskiy et al.(2013)
GATA3_HUMAN.H11MO.0.A
0.851 0.871
Gata2
M09121_2.00
Mus musculus
DVAGATAASVN

NBSTTATCTBH
Misc
Kulakovskiy et al.(2013)
GATA2_MOUSE.H11MO.0.A
0.851 0.871
Gata3
M09122_2.00
Mus musculus
NVWGATAAVVDBH

DVHBBTTATCWBN
Misc
Kulakovskiy et al.(2013)
GATA3_MOUSE.H11MO.0.A
0.851 0.871
GATA2
M09550_2.00
Homo sapiens
VWGATAAGVN

NBCTTATCWB
Misc
Heinz et al.(2010)
K562-GATA2_GSE18829
0.851 0.871
Gata3
M09551_2.00
Mus musculus
AGATBNNNAGATARV

BYTATCTNNNVATCT
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_1
0.851 0.871
Gata3
M09552_2.00
Mus musculus
AGATBDNNNNDSWGATWRNN

NNYWATCWSHNNNNHVATCT
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_2
0.851 0.871
Gata3
M09553_2.00
Mus musculus
NNNNNNWGATNDNATCWNNN

NNNWGATNHNATCWNNNNNN
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_3
0.851 0.871
Gata3
M09554_2.00
Mus musculus
NWGATNNNNATCWNN

NNWGATNNNNATCWN
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_4
0.851 0.871
Gata3
M09555_2.00
Mus musculus
WGATAAVV

BBTTATCW
Misc
Heinz et al.(2010)
iTreg-Gata3_GSE20898_5
0.851 0.871
GATA2
M10594_2.00
Homo sapiens
BVNGATRNBN

NVNYATCNBV
Transfac
Matys et al.(2006)
V$GATA2_01
0.851 0.871
GATA2
M10595_2.00
Homo sapiens
NNWGATAASR

YSTTATCWNN
Transfac
Matys et al.(2006)
V$GATA2_02
0.851 0.871
GATA2
M10596_2.00
Homo sapiens
HSAGATAWBA

TVWTATCWSD
Transfac
Matys et al.(2006)
V$GATA2_03
0.851 0.871
GATA2
M10597_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA2_Q5
0.851 0.871
GATA3
M10586_2.00
Homo sapiens
NNGATDRNR

YNYHATCNN
Transfac
Matys et al.(2006)
V$GATA3_01
0.851 0.871
GATA3
M10587_2.00
Homo sapiens
NRWGATAANA

TNTTATCWYN
Transfac
Matys et al.(2006)
V$GATA3_02
0.851 0.871
GATA3
M10588_2.00
Homo sapiens
ANWGATMWDA

THWKATCWNT
Transfac
Matys et al.(2006)
V$GATA3_03
0.851 0.871
GATA3
M10589_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA3_Q4
0.851 0.871
GATA2
M04880_2.00
Homo sapiens
NHGATADSV

BSHTATCDN
SELEX
Yin et al.(2017)
GATA2_eDBD_Methyl-HT-SELEX
0.851 0.871
GATA3
M04865_2.00
Homo sapiens
WGATAASGATCW

WGATCSTTATCW
SELEX
Yin et al.(2017)
GATA3_FL_Methyl-HT-SELEX_1
0.851 0.871
GATA3
M04866_2.00
Homo sapiens
WGATAASATCW

WGATSTTATCW
SELEX
Yin et al.(2017)
GATA3_FL_Methyl-HT-SELEX_2
0.851 0.871
Gata1
M08127_2.00
Mus musculus
RNAGATAAGRV

BYCTTATCTNY
ChIP-seq
Mathelier et al.(2014)
MA0035.3
0.851 0.843
Gata1
M09124_2.00
Mus musculus
BKBNNNNNNVWGATAAVVV

BBBTTATCWBNNNNNNVMV
Misc
Kulakovskiy et al.(2013)
GATA1_MOUSE.H11MO.0.A
0.851 0.843
GATA1
M02738_2.00
Homo sapiens
GATWASMH

DKSTWATC
SELEX
Jolma et al.(2010)
GATA1_dimer
0.851 0.829
GATA1
M02739_2.00
Homo sapiens
HGATAA

TTATCD
SELEX
Jolma et al.(2010)
GATA1_monomer
0.851 0.829
GATA1
M04861_2.00
Homo sapiens
GATAAKDNHMTTATC

GATAAKDNHMTTATC
SELEX
Yin et al.(2017)
GATA1_eDBD_HT-SELEX
0.851 0.829
GATA1
M07963_2.00
Homo sapiens
NSWGATAASVN

NBSTTATCWSN
ChIP-seq
Gerstein et al.(2012)
K562b_GATA1_UCD
0.851 0.829
GATA1
M07964_2.00
Homo sapiens
NNKNNNNNNNSWGATAAV

BTTATCWSNNNNNNNMNN
ChIP-seq
Gerstein et al.(2012)
PBDE_GATA1_UCD
0.851 0.829
GATA1
M08202_2.00
Homo sapiens
NBKBNNNNNNSWGATAASVN

NBSTTATCWSNNNNNNVMVN
ChIP-seq
Contrino et al.(2012)
Mv73
0.851 0.829
GATA1
M08203_2.00
Homo sapiens
WGATNNNATC

GATNNNATCW
ChIP-seq
Contrino et al.(2012)
Mv75
0.851 0.829
GATA1
M09115_2.00
Homo sapiens
NBKBNNNNNNVWGATAAVV

BBTTATCWBNNNNNNVMVN
Misc
Kulakovskiy et al.(2013)
GATA1_HUMAN.H11MO.0.A
0.851 0.829
GATA1
M09549_2.00
Homo sapiens
SWGATAAGVV

BBCTTATCWS
Misc
Heinz et al.(2010)
K562-GATA1_GSE18829
0.851 0.829
GATA1
M10577_2.00
Homo sapiens
SVNGATDBBN

NVVHATCNBS
Transfac
Matys et al.(2006)
V$GATA1_01
0.851 0.829
GATA1
M10578_2.00
Homo sapiens
NHVNHGATAVKVBN

NVBMBTATCDNBDN
Transfac
Matys et al.(2006)
V$GATA1_02
0.851 0.829
GATA1
M10579_2.00
Homo sapiens
RNSNDGATTRBNRN

NYNVYAATCHNSNY
Transfac
Matys et al.(2006)
V$GATA1_03
0.851 0.829
GATA1
M10580_2.00
Homo sapiens
DNVWGATARVNVN

NBNBYTATCWBNH
Transfac
Matys et al.(2006)
V$GATA1_04
0.851 0.829
GATA1
M10581_2.00
Homo sapiens
VMHGATAAVM

KBTTATCDKB
Transfac
Matys et al.(2006)
V$GATA1_05
0.851 0.829
GATA1
M10582_2.00
Homo sapiens
MNAGATAAVR

YBTTATCTNK
Transfac
Matys et al.(2006)
V$GATA1_06
0.851 0.829
GATA1
M10583_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA1_10
0.851 0.829
GATA1
M10584_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GATA1_Q6
0.851 0.829
GATA1
M04862_2.00
Homo sapiens
GATAABNNNVTTATC

GATAABNNNVTTATC
SELEX
Yin et al.(2017)
GATA1_eDBD_Methyl-HT-SELEX
0.851 0.829
pnr
M03757_2.00
Drosophila melanogaster
NGATAAGATAASN

NSTTATCTTATCN
SELEX
Nitta et al.(2015)
pnr_1
0.850 0.871
pnr
M03758_2.00
Drosophila melanogaster
NHGATAASV

BSTTATCDN
SELEX
Nitta et al.(2015)
pnr_2
0.850 0.871
pnr
M06204_2.00
Drosophila melanogaster
BWGATAA

TTATCWV
B1H
Zhu et al.(2011)
pnr_SANGER_5_FBgn0003117
0.850 0.871
pnr
M08204_2.00
Drosophila melanogaster
ANHNNBHGATAASSDNNB

VNNHSSTTATCDVNNDNT
ChIP-seq
Contrino et al.(2012)
Mf28
0.850 0.871
pnr
M08418_2.00
Drosophila melanogaster
YATCGATWKBY

RVMWATCGATR
ChIP-chip
Mathelier et al.(2014)
MA0536.1
0.850 0.871
grn
M03754_2.00
Drosophila melanogaster
HGATAASV

BSTTATCD
SELEX
Nitta et al.(2015)
grn_1
0.845 0.886
grn
M03755_2.00
Drosophila melanogaster
NHGATAAGNNNCTTATCDN

NHGATAAGNNNCTTATCDN
SELEX
Nitta et al.(2015)
grn_2
0.845 0.886
grn
M03756_2.00
Drosophila melanogaster
NHGATAACNNNGTTATCDN

NHGATAACNNNGTTATCDN
SELEX
Nitta et al.(2015)
grn_3
0.845 0.886
srp
M03759_2.00
Drosophila melanogaster
NHGATAAVV

BBTTATCDN
SELEX
Nitta et al.(2015)
srp_1
0.845 0.843
srp
M03760_2.00
Drosophila melanogaster
NHGATAABV

BVTTATCDN
SELEX
Nitta et al.(2015)
srp_2
0.845 0.843
srp
M06205_2.00
Drosophila melanogaster
VTCWABCSATAV

BTAWSGVTWGAB
B1H
Zhu et al.(2011)
srp_FlyReg_FBgn0003507
0.845 0.843
srp
M06206_2.00
Drosophila melanogaster
WGATAAGV

BCTTATCW
B1H
Zhu et al.(2011)
srp_SANGER_5_FBgn0003507
0.845 0.843
srp
M09670_2.00
Drosophila melanogaster
KHGATARBV

BVYTATCDM
Misc
Kulakovskiy et al.(2009)
srp
0.845 0.843
elt-1
M08206_2.00
Caenorhabditis elegans
GATWDNVATCT

AGATBNHWATC
ChIP-seq
Contrino et al.(2012)
Mw144
0.839 0.757
elt-1
M08207_2.00
Caenorhabditis elegans
TGATAASR

YSTTATCA
ChIP-seq
Contrino et al.(2012)
Mw145
0.839 0.757
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH71122 GATA 186 220
AAH71122 GATA 240 274

Links

Other GATA family TFs
Other Xenopus laevis TFs

550 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF118 Arabidopsis thaliana AT1G68550 D 0.000
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.000
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.000
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.000
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.000
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.000
Lus10021678.g Linum usitatissimum Lus10021678.g I 0.000
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.000
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.000
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.000
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.000
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.000
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.000
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.000
TCM_011811 Theobroma cacao TCM_011811 I 0.000
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.000
27524.m000298 Ricinus communis 27524.m000298 I 0.000
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.000
Lus10035018.g Linum usitatissimum Lus10035018.g N 0.000