22393_YLR013W (Saccharomyces mikatae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 22393_YLR013W T197013_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GAT4
M00050_2.00
Saccharomyces cerevisiae
NNAGATCTMN

NKAGATCTNN
PBM
Badis et al.(2008)
GAT4_4527
0.836 0.722
GAT4
M01547_2.00
Saccharomyces cerevisiae
NNNRWWYNNN

NNNRWWYNNN
PBM
Zhu et al.(2009)
Gat4
0.836 0.722
GAT4
M07479_2.00
Saccharomyces cerevisiae
NNAGATCYNNN

NNNRGATCTNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0302.1
0.836 0.722
GAT4
M08561_2.00
Saccharomyces cerevisiae
NNAGATCYNNN

NNNRGATCTNN
Misc
DeBoer et al.(2011)
YIR013C_565
0.836 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22393_YLR013W GATA 69 105

Links

Other GATA family TFs
Other Saccharomyces mikatae TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.000
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.000
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.000
CBN13569 Caenorhabditis brenneri CBN13569 I 0.000
CBN28290 Caenorhabditis brenneri CBN28290 I 0.000
CBN21486 Caenorhabditis brenneri CBN21486 I 0.000
CBG06599 Caenorhabditis briggsae CBG06599 I 0.000
CBG22870 Caenorhabditis briggsae CBG22870 I 0.000
CBG20729 Caenorhabditis briggsae CBG20729 I 0.000
CBG20727 Caenorhabditis briggsae CBG20727 I 0.000
CBG09567 Caenorhabditis briggsae CBG09567 I 0.000
CBG09320 Caenorhabditis briggsae CBG09320 I 0.000
CBG06601 Caenorhabditis briggsae CBG06601 I 0.000
CBG06611 Caenorhabditis briggsae CBG06611 I 0.000
CBG06609 Caenorhabditis briggsae CBG06609 I 0.000
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.000
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.000
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.000
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.000
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.000
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.000
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.000
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.000
CJA28065 Caenorhabditis japonica CJA28065 I 0.000
CJA09697 Caenorhabditis japonica CJA09697 I 0.000
CRE31070 Caenorhabditis remanei CRE31070 I 0.000
CRE08691 Caenorhabditis remanei CRE08691 I 0.000
CRE08749 Caenorhabditis remanei CRE08749 I 0.000
CRE08750 Caenorhabditis remanei CRE08750 N 0.000
CRE15644 Caenorhabditis remanei CRE15644 I 0.000
CRE15675 Caenorhabditis remanei CRE15675 I 0.000
CRE18430 Caenorhabditis remanei CRE18430 I 0.000
CRE18699 Caenorhabditis remanei CRE18699 I 0.000
CRE30948 Caenorhabditis remanei CRE30948 I 0.000
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.000
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.000
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.000
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.000
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.000
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.000
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.000
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.000
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.000
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.000
Minc14668 Meloidogyne incognita Minc14668 I 0.000
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.000
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.000
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.000
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.000
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.000
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.000
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.000
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.000
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.000
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.000
L889_g6806 Steinernema feltiae L889_g6806 N 0.000
L889_g6692 Steinernema feltiae L889_g6692 I 0.000
L889_g6694 Steinernema feltiae L889_g6694 I 0.000
L889_g6695 Steinernema feltiae L889_g6695 I 0.000
L889_g6696 Steinernema feltiae L889_g6696 I 0.000
L889_g6792 Steinernema feltiae L889_g6792 I 0.000
L893_g18997 Steinernema glaseri L893_g18997 I 0.000
L893_g18992 Steinernema glaseri L893_g18992 I 0.000
L898_g3515 Steinernema monticolum L898_g3515 I 0.000
L898_g3512 Steinernema monticolum L898_g3512 I 0.000
L898_g12798 Steinernema monticolum L898_g12798 I 0.000
L898_g3514 Steinernema monticolum L898_g3514 I 0.000
L898_g4018 Steinernema monticolum L898_g4018 N 0.000
L892_g14825 Steinernema scapterisci L892_g14825 I 0.000
L892_g2782 Steinernema scapterisci L892_g2782 I 0.000
L892_g2781 Steinernema scapterisci L892_g2781 I 0.000
L892_g2780 Steinernema scapterisci L892_g2780 I 0.000
L892_g14834 Steinernema scapterisci L892_g14834 N 0.000
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.000
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.000