CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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24940_YPL021W
(
Saccharomyces bayanus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
24940_YPL021W
T197017_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ECM23
M00054_2.00
Saccharomyces cerevisiae
DAGATCYV
BRGATCTH
PBM
Badis et al.(2008)
ECM23_2123
0.824
0.917
ECM23
M07483_2.00
Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0293.1
0.824
0.917
ECM23
M08566_2.00
Saccharomyces cerevisiae
NNAGATCNNNN
NNNNGATCTNN
Misc
DeBoer et al.(2011)
YPL021W_578
0.824
0.917
SRD1
M00047_2.00
Saccharomyces cerevisiae
RGATCTMC
GKAGATCY
PBM
Badis et al.(2008)
SRD1_2031
0.808
0.667
SRD1
M01544_2.00
Saccharomyces cerevisiae
NBAGWTYNN
NNRAWCTVN
PBM
Zhu et al.(2009)
Srd1
0.808
0.667
SRD1
M07476_2.00
Saccharomyces cerevisiae
RGATCTVN
NBAGATCY
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0389.1
0.808
0.667
SRD1
M08558_2.00
Saccharomyces cerevisiae
RGATCTMN
NKAGATCY
Misc
DeBoer et al.(2011)
YCR018C_530
0.808
0.667
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
24940_YPL021W
GATA
117
159
PNGQLKECAACGDTWTSQWRSGPDGNVELCSRCGIAYRKKIEK
Links
Other
GATA
family TFs
Other
Saccharomyces bayanus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy