CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB00430.1
(
Alternaria brassicicola
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
AB00430.1
T197026_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.854
0.814
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB00430.1
GATA
113
147
CSNCKTTQTPLWRRSPAGETVCNACGLYMKARNQS
AB00430.1
GATA
268
302
CQNCATTITPLWRRDDAGHIICNACGLYYKLHGTH
Links
Other
GATA
family TFs
Other
Alternaria brassicicola
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy