LjSGA_060304.1 (Lotus japonicus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 LjSGA_060304.1 T197112_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA26
M02001_2.00
Arabidopsis thaliana
NNKATBNNNN

NNNNVATMNN
PBM
Weirauch et al.(2014)
pTH7490
0.827 1.000
GATA27
M02005_2.00
Arabidopsis thaliana
NNGATBNNN

NNNVATCNN
PBM
Weirauch et al.(2014)
pTH7492
0.827 0.964
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_060304.1 GATA 1 28

Links

Other GATA family TFs
Other Lotus japonicus TFs

Invalid Input OrderBy

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action