CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc08374
(
Meloidogyne incognita
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Minc08374
T197140_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN
NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.842
0.800
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN
NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.838
0.771
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc08374
GATA
389
423
CNNCFTTKTTAWRRDATGSLVCNACGLYFRLHRTN
Links
Other
GATA
family TFs
Other
Meloidogyne incognita
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy