CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_005050
(
Penicillium marneffei
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
PMAA_005050
T197219_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.914
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_005050.t1
GATA
892
926
CANCGTRNTPEWRRGPSGHRDLCNSCGLRWAKQVG
PMAA_005050.t2
GATA
892
927
CANCGTRNTPEWRRGPSGHRDLCNSCGLRWAKQNGR
Links
Other
GATA
family TFs
Other
Penicillium marneffei
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy