CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000000401
(
Gongylonema pulchrum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
GPUH_0000000401
T197511_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000000401-mRNA-1
GATA
212
250
CEECGTDFTPVWRAIGADENSLNLYCDACVKTAQKKKMR
Links
Other
GATA
family TFs
Other
Gongylonema pulchrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nDi.2.2.2.g09001
Dirofilaria immitis
nDi.2.2.2.g09001
N
0.852
nLs.2.1.2.g01244
Litomosoides sigmodontis
nLs.2.1.2.g01244
N
0.852
OFLC_0001516201
Onchocerca flexuosa
OFLC_0001516201
N
0.852
nAv.1.0.1.g04819
Acanthocheilonema viteae
nAv.1.0.1.g04819
N
0.852
EEL_0000864501
Elaeophora elaphi
EEL_0000864501
N
0.852
Bm2395
Brugia malayi
Bm2395
N
0.852
LOAG_09301
Loa loa
LOAG_09301
N
0.852
BTMF_0000516101
Brugia timori
BTMF_0000516101
N
0.852
WUBG_07693
Wuchereria bancrofti
WUBG_07693
N
0.852