Hba_00399 (Heterorhabditis bacteriophora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Hba_00399 T197515_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN

NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.856 0.857
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA

TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
0.856 0.857
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA

TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
0.856 0.857
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hba_00399 GATA 201 235

Links

Other GATA family TFs
Other Heterorhabditis bacteriophora TFs

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24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action