CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01423500
(
Haemonchus contortus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
HCOI01423500
T197524_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01423500.t1
GATA
180
214
CVNCGVQATPLWRRDGTGHYLCNACGLYHKMNGQN
HCOI01423500.t1
GATA
234
250
CVNCNTNTTTLWRRNGG
HCOI01423500.t2
GATA
173
207
CVNCGVQATPLWRRDGTGHYLCNACGLYHKMNGQN
HCOI01423500.t2
GATA
227
243
CVNCNTNTTTLWRRNGG
HCOI01423500.t3
GATA
175
209
CVNCGVQATPLWRRDGTGHYLCNACGLYHKMNGQN
HCOI01423500.t3
GATA
229
245
CVNCNTNTTTLWRRNGG
HCOI01423500.t4
GATA
196
230
CVNCGVQATPLWRRDGTGHYLCNACGLYHKMNGQN
HCOI01423500.t4
GATA
250
266
CVNCNTNTTTLWRRNGG
Links
Other
GATA
family TFs
Other
Haemonchus contortus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pvit_01015
Pogona vitticeps
Pvit_01015
N
0.854
Aan_R012985
Calypte anna
Aan_R012985
N
0.847
ENSPMAG00000000184
Petromyzon marinus
ENSPMAG00000000184
N
0.847
ENSTSYG00000009547
Tarsius syrichta
ENSTSYG00000009547
I
0.840
HPLM_0000721601
Haemonchus placei
HPLM_0000721601
I
0.803
ACOC_0000198301
Angiostrongylus costaricensis
ACOC_0000198301
I
0.803
DICVIV_06451
Dictyocaulus viviparus
DICVIV_06451
I
0.803