CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0002562201
(
Heligmosomoides bakeri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
HPBE_0002562201
T197538_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002562201-mRNA-1
GATA
409
442
QATESSTWHNWGPASLNLRLCQECWTYWKKYGGL
Links
Other
GATA
family TFs
Other
Heligmosomoides bakeri
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0001560201
Haemonchus placei
HPLM_0001560201
N
0.915
ANCCEY_13862
Ancylostoma ceylanicum
ANCCEY_13862
N
0.883
ANCCAN_04914
Ancylostoma caninum
ANCCAN_04914
N
0.883
NBR_0001426901
Nippostrongylus brasiliensis
NBR_0001426901
N
0.877
TELCIR_06695
Teladorsagia circumcincta
TELCIR_06695
N
0.852
SVUK_0000622201
Strongylus vulgaris
SVUK_0000622201
N
0.840
HCOI00708300
Haemonchus contortus
HCOI00708300
N
0.827
ANCDUO_01695
Ancylostoma duodenale
ANCDUO_01695
N
0.827
ASU_04577
Ascaris suum
ASU_04577
N
0.744
TCNE_0001907801
Toxocara canis
TCNE_0001907801
N
0.732
scaffold26-EXSNAP2012.56
Pristionchus exspectatus
scaffold26-EXSNAP2012.56
N
0.732
ISCW003309
Ixodes scapularis
ISCW003309
N
0.718
ACYPI001458
Acyrthosiphon pisum
ACYPI001458
N
0.706
GPUH_0001020201
Gongylonema pulchrum
GPUH_0001020201
N
0.704
ADIR005407
Anopheles dirus
ADIR005407
N
0.701
ACEP14882
Atta cephalotes
ACEP14882
N
0.701