L893_g28710 (Steinernema glaseri)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 L893_g28710 T197570_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN

NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.842 0.857
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN

NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.838 0.829
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g28710.t1 GATA 395 429
L893_g28710.t2 GATA 393 427

Links

Other GATA family TFs
Other Steinernema glaseri TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB02840.1 Alternaria brassicicola AB02840.1 N 0.000
COCC4DRAFT_70036 Bipolaris maydis COCC4DRAFT_70036 N 0.000
COCMIDRAFT_89521 Bipolaris oryzae COCMIDRAFT_89521 N 0.000
COCSADRAFT_340084 Bipolaris sorokiniana COCSADRAFT_340084 N 0.000
COCVIDRAFT_41079 Bipolaris victoriae COCVIDRAFT_41079 N 0.000
COCCADRAFT_34579 Bipolaris zeicola COCCADRAFT_34579 N 0.000
estExt_fgenesh1_pg.C_30319 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_30319 N 0.000
W97_01193 Coniosporium apollinis W97_01193 N 0.000
LEMA_P028230.1 Leptosphaeria maculans LEMA_P028230.1 N 0.000
UCRNP2_1319 Neofusicoccum parvum UCRNP2_1319 N 0.000
SNOG_15257 Phaeosphaeria nodorum SNOG_15257 N 0.000
PTT_14037 Pyrenophora teres PTT_14037 N 0.000
PTRG_07916 Pyrenophora triticirepentis PTRG_07916 N 0.000
SETTUDRAFT_183743 Setosphaeria turcica SETTUDRAFT_183743 N 0.000
SNOG_15257 Stagonospora nodorum SNOG_15257 N 0.000
PV09_01640 Verruconis gallopava PV09_01640 N 0.000