maker-nMf.1.1.scaf08707-augustus-gene-0.3 (Meloidogyne floridensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 maker-nMf.1.1.scaf08707-augustus-gene-0.3 T197615_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG13549
M01231_2.00 		Caenorhabditis briggsae
NTGATAAN
NTTATCAN		 PBM
Lambert et al.(2019)
pTH11492 		0.842 0.829
elt-6
M00666_2.00 		Caenorhabditis elegans
NTGATAAN
NTTATCAN		 PBM
Narasimhan et al.(2015)
pTH10707 		0.838 0.800
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf08707-augustus-gene-0.3-mRNA-1 GATA 183 217

Links

Other GATA family TFs
Other Meloidogyne floridensis TFs

Invalid Input OrderBy

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action