CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig309.frz3.gene13
(
Meloidogyne hapla
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
MhA1_Contig309.frz3.gene13
T197669_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig309.frz3.gene13
GATA
550
586
CEGCNIIEAYQWYLWGPANQLRLCGDCWNIWKKRGGL
Links
Other
GATA
family TFs
Other
Meloidogyne hapla
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000089000
Globodera pallida
GPLIN_000089000
N
0.790
TCLT_0000698201
Thelazia callipaeda
TCLT_0000698201
N
0.728
nAv.1.0.1.g07054
Acanthocheilonema viteae
nAv.1.0.1.g07054
N
0.707
OFLC_0001456001
Onchocerca flexuosa
OFLC_0001456001
N
0.704
WBGene00249034
Onchocerca volvulus
WBGene00249034
N
0.704
nOo.2.0.1.g01527
Onchocerca ochengi
nOo.2.0.1.g01527
N
0.704
nLs.2.1.2.g05824
Litomosoides sigmodontis
nLs.2.1.2.g05824
N
0.704
LOAG_18231
Loa loa
LOAG_18231
N
0.704
nDi.2.2.2.g07220
Dirofilaria immitis
nDi.2.2.2.g07220
N
0.704
GPUH_0001020201
Gongylonema pulchrum
GPUH_0001020201
N
0.704