CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig88.frz3.gene107
(
Meloidogyne hapla
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
MhA1_Contig88.frz3.gene107
T197673_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig88.frz3.gene107
GATA
307
330
CSNCKGSSTTLWRRDQNGQPVCKK
Links
Other
GATA
family TFs
Other
Meloidogyne hapla
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_3000073
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000073
N
0.851
PISMIDRAFT_67912
Pisolithus microcarpus
PISMIDRAFT_67912
N
0.847
PAXRUDRAFT_37111
Paxillus rubicundulus
PAXRUDRAFT_37111
N
0.847
ENSOANG00000010765
Ornithorhynchus anatinus
ENSOANG00000010765
N
0.847
CY34DRAFT_102132
Suillus luteus
CY34DRAFT_102132
N
0.832
CHLREDRAFT_142188
Chlamydomonas reinhardtii
CHLREDRAFT_142188
N
0.832
SERLA73DRAFT_61122
Serpula lacrymans
SERLA73DRAFT_61122
N
0.819
SCLCIDRAFT_75575
Scleroderma citrinum
SCLCIDRAFT_75575
N
0.819
M404DRAFT_622429
Pisolithus tinctorius
M404DRAFT_622429
N
0.819
K443DRAFT_543678
Laccaria amethystina
K443DRAFT_543678
N
0.819
LACBIDRAFT_308018
Laccaria bicolor
LACBIDRAFT_308018
N
0.819
AGABI2DRAFT_70769
Agaricus bisporus
AGABI2DRAFT_70769
N
0.819
M413DRAFT_76110
Hebeloma cylindrosporum
M413DRAFT_76110
N
0.819