OESDEN_09249 (Oesophagostomum dentatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 OESDEN_09249 T197728_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN

NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.867 0.912
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN

NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.851 0.853
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OESDEN_09249 GATA 257 290

Links

Other GATA family TFs
Other Oesophagostomum dentatum TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH54 Arabidopsis thaliana AT1G27740 N 0.000
Bo3g142890 Brassica oleracea Bo3g142890 N 0.000
Bo5g052310 Brassica oleracea Bo5g052310 N 0.000
Bo7g048630 Brassica oleracea Bo7g048630 N 0.000
Bostr.15697s0100 Boechera stricta Bostr.15697s0100 N 0.000
Bra010921 Brassica rapa Bra010921 N 0.000
Bra030063 Brassica rapa Bra030063 N 0.000
Bra032846 Brassica rapa Bra032846 N 0.000
BRADI1G70860 Brachypodium distachyon BRADI1G70860 N 0.000
Cagra.1822s0081 Capsella grandiflora Cagra.1822s0081 N 0.000
Carubv10011072m.g Capsella rubella Carubv10011072m.g N 0.000
chr5.CM0096.500.nd Lotus japonicus chr5.CM0096.500.nd N 0.000
chr5.CM0200.480.nc Lotus japonicus chr5.CM0200.480.nc N 0.000
F775_27628 Aegilops tauschii F775_27628 N 0.000
gene25555-v1.0-hybrid Fragaria vesca gene25555-v1.0-hybrid N 0.000
mgf019332m Mimulus guttatus mgf019332m N 0.000
Pm021172 Prunus mume Pm021172 N 0.000
RSL4 Arabidopsis lyrata fgenesh2_kg.1__2933__AT1G27740.1 N 0.000
Thhalv10009862m.g Eutrema salsugineum Thhalv10009862m.g N 0.000
Traes_4AL_6A6EC9A6A Triticum aestivum Traes_4AL_6A6EC9A6A N 0.000
Traes_4BS_9BFCC52AD Triticum aestivum Traes_4BS_9BFCC52AD N 0.000
Traes_4DS_7488F4608 Triticum aestivum Traes_4DS_7488F4608 N 0.000
Traes_5AL_ED57961C7 Triticum aestivum Traes_5AL_ED57961C7 N 0.000
Traes_5BL_E1D1D198E Triticum aestivum Traes_5BL_E1D1D198E N 0.000