scaffold1020-EXSNAP2012.4 (Pristionchus exspectatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 scaffold1020-EXSNAP2012.4 T197773_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN

NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.855 0.743
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA

TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
0.855 0.743
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA

TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
0.855 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1020-EXSNAP2012.4 GATA 126 160

Links

Other GATA family TFs
Other Pristionchus exspectatus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000964201 Angiostrongylus cantonensis ACAC_0000964201 I 0.824
ACOC_0000090001 Angiostrongylus costaricensis ACOC_0000090001 I 0.824
ANCCAN_11157 Ancylostoma caninum ANCCAN_11157 I 0.824
ANCDUO_15230 Ancylostoma duodenale ANCDUO_15230 I 0.824
ANCDUO_24750 Ancylostoma duodenale ANCDUO_24750 I 0.824
BXY_0111400 Bursaphelenchus xylophilus BXY_0111400 I 0.850
CBG07341 Caenorhabditis briggsae CBG07341 D 0.855
CBN16869 Caenorhabditis brenneri CBN16869 I 0.855
CJA17630 Caenorhabditis japonica CJA17630 I 0.855
CRE22330 Caenorhabditis remanei CRE22330 I 0.855
DICVIV_08599 Dictyocaulus viviparus DICVIV_08599 I 0.824
Hba_00399 Heterorhabditis bacteriophora Hba_00399 I 0.855
HCOI00096800 Haemonchus contortus HCOI00096800 I 0.824
HCOI00225500 Haemonchus contortus HCOI00225500 I 0.850
HCOI01260600 Haemonchus contortus HCOI01260600 I 0.850
HPBE_0001898401 Heligmosomoides bakeri HPBE_0001898401 I 0.824
NBR_0002046501 Nippostrongylus brasiliensis NBR_0002046501 I 0.824
OESDEN_01952 Oesophagostomum dentatum OESDEN_01952 I 0.824
OESDEN_22429 Oesophagostomum dentatum OESDEN_22429 I 0.824
Ppa-elt-3 Pristionchus pacificus PPA00209 I 0.867
PPA05888 Pristionchus pacificus PPA05888 I 0.856
scaffold161-EXSNAP2012.12 Pristionchus exspectatus scaffold161-EXSNAP2012.12 I 0.856
TELCIR_03216 Teladorsagia circumcincta TELCIR_03216 I 0.824
elt-3 Caenorhabditis elegans WBGene00001251 D 0.855