scaffold1020-EXSNAP2012.4 (Pristionchus exspectatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 scaffold1020-EXSNAP2012.4 T197773_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN

NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.855 0.743
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA

TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
0.855 0.743
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA

TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
0.855 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1020-EXSNAP2012.4 GATA 126 160

Links

Other GATA family TFs
Other Pristionchus exspectatus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
STKL1 Arabidopsis thaliana AT4G00238 D 0.000
STKL2 Arabidopsis thaliana AT4G00250 D 0.000
AT1G44810 Arabidopsis thaliana AT1G44810 N 0.000