scaffold1020-EXSNAP2012.4 (Pristionchus exspectatus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 scaffold1020-EXSNAP2012.4 T197773_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN

NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.855 0.743
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA

TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
0.855 0.743
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA

TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
0.855 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1020-EXSNAP2012.4 GATA 126 160

Links

Other GATA family TFs
Other Pristionchus exspectatus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006226 Ailuropoda melanoleuca ENSAMEG00000006226 I 0.000
Alligator_sinensis_CCG021550.1 Alligator sinensis Alligator_sinensis_CCG021550.1 I 0.000
SALL2 Anolis carolinensis ENSACAG00000000030 I 0.000
SALL2 Callithrix jacchus ENSCJAG00000008855 I 0.000
SALL2 Canis familiaris ENSCAFG00000005676 I 0.000
ENSCPOG00000001022 Cavia porcellus ENSCPOG00000001022 I 0.000
Cmyd_10001224 Chelonia mydas Cmyd_10001224 I 0.000
ENSCSAG00000016461 Chlorocebus sabaeus ENSCSAG00000016461 I 0.000
SALL2 Dasypus novemcinctus ENSDNOG00000032317 I 0.000
SALL2 Equus caballus ENSECAG00000024449 I 0.000
SALL2 Felis catus ENSFCAG00000026866 I 0.000
SALL2 Gorilla gorilla ENSGGOG00000009133 I 0.000
SALL2 Homo sapiens ENSG00000165821 D 0.000
ENSSTOG00000023637 Ictidomys tridecemlineatus ENSSTOG00000023637 I 0.000
SALL2 Loxodonta africana ENSLAFG00000032150 I 0.000
ENSP00000333537 Macaca fascicularis ENSP00000333537 I 0.000
ENSMEUG00000000526 Macropus eugenii ENSMEUG00000000526 I 0.000
SALL2 Microcebus murinus ENSMICG00000015037 I 0.000
ENSMPUG00000000199 Mustela putorius furo ENSMPUG00000000199 I 0.000
Myotis_brandtii_SALL2_10005316 Myotis brandtii Myotis_brandtii_SALL2_10005316 I 0.000
SALL2 Myotis lucifugus ENSMLUG00000009185 I 0.000
ENSNLEG00000014602 Nomascus leucogenys ENSNLEG00000014602 I 0.000
Ogr13603 Ophisaurus gracilis Ogr13603 I 0.000
SALL2 Oryctolagus cuniculus ENSOCUG00000027464 I 0.000
SALL2 Otolemur garnettii ENSOGAG00000031464 I 0.000
ENSOARG00000019612 Ovis aries ENSOARG00000019612 I 0.000
SALL2 Pan troglodytes ENSPTRG00000006128 I 0.000
ENSPANG00000020006 Papio anubis ENSPANG00000020006 I 0.000
ENSPPYG00000005600 Pongo abelii ENSPPYG00000005600 I 0.000
SALL2 Procavia capensis ENSPCAG00000006689 I 0.000
SALL2 Pteropus vampyrus ENSPVAG00000000277 I 0.000
SALL2 Sus scrofa ENSSSCG00000022705 I 0.000
SALL2 Tursiops truncatus ENSTTRG00000012842 I 0.000
CAJ82406 Xenopus tropicalis CAJ82406 I 0.000