GCM1 (Canis familiaris)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSCAFG00000002273 T197970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GCM1
M02020_2.00
Homo sapiens
NVTVNGGGN

NCCCNBABN
PBM
Weirauch et al.(2014)
pTH7965
0.971 0.971
GCM1
M03068_2.00
Homo sapiens
BATGCGGGTR

YACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_1
0.971 0.971
GCM1
M03069_2.00
Homo sapiens
RTRYKGGYRCCMGYAN

NTRCKGGYRCCMRYAY
SELEX
Jolma et al.(2013)
GCM1_2
0.971 0.971
GCM1
M03070_2.00
Homo sapiens
BATGCGGGTRS

SYACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_3
0.971 0.971
GCM1
M04883_2.00
Homo sapiens
RTGSGGGBV

BVCCCSCAY
SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX
0.971 0.971
GCM1
M05868_2.00
Homo sapiens
ATGCGGGYV

BRCCCGCAT
SMiLE-seq
Isakova et al.(2017)
GCM1
0.971 0.971
GCM1
M10603_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMA_Q4
0.971 0.971
GCM1
M10604_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCM_Q2
0.971 0.971
GCM1
M04884_2.00
Homo sapiens
ATRNKGGYV

BRCCMNYAT
SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX
0.971 0.971
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.957 0.957
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.949 0.949
XP_004449939.1
M02027_2.00
Dasypus novemcinctus
RTRSGGGY

RCCCSYAY
PBM
Weirauch et al.(2014)
pTH9259
0.920 0.920
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.870 0.870
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.739 0.739
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.717 0.717
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.710 0.710
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.688 0.688
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.688 0.688
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.688 0.688
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.688 0.688
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000003304 GCM 30 167

Links

Other GCM family TFs
Other Canis familiaris TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000623 Aedes aegypti AAEL000623 I 0.630
AALB008013 Anopheles albimanus AALB008013 I 0.609
Aan_R001196 Calypte anna Aan_R001196 I 0.870
Aan_R001550 Calypte anna Aan_R001550 I 0.739
AARA011980 Anopheles arabiensis AARA011980 I 0.616
AATE008476 Anopheles atroparvus AATE008476 I 0.609
ACHR001414 Anopheles christyi ACHR001414 I 0.614
ACOM031025 Anopheles coluzzii ACOM031025 I 0.621
ACUA009622 Anopheles culicifacies ACUA009622 I 0.614
ADIR000711 Anopheles dirus ADIR000711 I 0.616
AEPI007160 Anopheles epiroticus AEPI007160 I 0.614
AFAF005680 Anopheles farauti AFAF005680 I 0.616
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.848
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.739
AFUN009837 Anopheles funestus AFUN009837 I 0.630
AGAP007783 Anopheles gambiae AGAP007783 I 0.623
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.746
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.725
AMAM003661 Anopheles maculatus AMAM003661 I 0.623
AMAM005757 Anopheles maculatus AMAM005757 I 0.615
AMEM005966 Anopheles merus AMEM005966 I 0.621
AMIN006368 Anopheles minimus AMIN006368 I 0.623
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.623
ASIS002985 Anopheles sinensis ASIS002985 I 0.609
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.623
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.848
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.746
CapteG133139 Capitella teleta CapteG133139 I 0.616
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.638
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.703
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.725
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.681
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.993
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.717
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.739
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.870
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.957
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.928
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.688
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.971
ENSETEG00000005181 Echinops telfairi ENSETEG00000005181 I 0.819
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.870
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.739
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.696
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.775
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.717
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.710
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.746
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.957
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.935
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.703
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.688
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 1.000
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.688
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.971
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.957
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.710
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.717
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.971
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.688
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.696
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.696
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.710
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.732
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.688
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.971
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.717
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.899
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.688
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.964
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.957
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.681
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.877
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.906
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.855
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.609
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.710
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.906
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.703
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.710
GCM1 Bos taurus ENSBTAG00000008148 I 0.957
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.964
GCM1 Felis catus ENSFCAG00000009490 I 1.000
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.870
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.949
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.949
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.942
GCM1 Equus caballus ENSECAG00000014228 I 0.964
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.710
GCM1 Homo sapiens ENSG00000137270 D 0.971
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.913
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.971
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.971
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.928
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.971
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.964
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.768
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.920
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.963
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.971
GCM1 Gallus gallus ENSGALG00000016316 I 0.862
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.949
Gcm1 Mus musculus ENSMUSG00000023333 D 0.957
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.964
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.833
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.725
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.688
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.696
GCM2 Echinops telfairi ENSETEG00000012473 I 0.661
gcm2 Danio rerio ENSDARG00000045413 I 0.746
GCM2 Equus caballus ENSECAG00000017632 I 0.681
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.674
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.681
GCM2 Procavia capensis ENSPCAG00000011887 I 0.659
GCM2 Canis familiaris ENSCAFG00000009747 I 0.688
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.717
GCM2 Bos taurus ENSBTAG00000018787 I 0.696
GCM2 Felis catus ENSFCAG00000001608 I 0.688
GCM2 Homo sapiens ENSG00000124827 D 0.688
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.688
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.688
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.681
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.717
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.739
gcm2 Oryzias latipes ENSORLG00000019715 I 0.717
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.688
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.681
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.659
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.703
Gcm2 Mus musculus ENSMUSG00000021362 I 0.688
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.688
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.703
GCM2 Gallus gallus ENSGALG00000012768 I 0.732
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.688
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.659
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.732
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.681
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.696
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.667
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.688
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.688
gcm2.S Xenopus laevis XB-GENE-866131 I 0.725
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.739
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.855
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.949
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.630
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.638
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.855
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.725
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.623
Tal_R009935 Tyto alba Tal_R009935 I 0.855
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.621
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.920
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.609