GCM2 (Felis catus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSFCAG00000001608 T197994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.957 0.957
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.957 0.957
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.957 0.957
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.957 0.957
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.884 0.884
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.833 0.833
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.826 0.826
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.710 0.710
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.710 0.710
XP_004449939.1
M02027_2.00
Dasypus novemcinctus
RTRSGGGY

RCCCSYAY
PBM
Weirauch et al.(2014)
pTH9259
0.703 0.703
GCM1
M02020_2.00
Homo sapiens
NVTVNGGGN

NCCCNBABN
PBM
Weirauch et al.(2014)
pTH7965
0.696 0.696
GCM1
M03068_2.00
Homo sapiens
BATGCGGGTR

YACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_1
0.696 0.696
GCM1
M03069_2.00
Homo sapiens
RTRYKGGYRCCMGYAN

NTRCKGGYRCCMRYAY
SELEX
Jolma et al.(2013)
GCM1_2
0.696 0.696
GCM1
M03070_2.00
Homo sapiens
BATGCGGGTRS

SYACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_3
0.696 0.696
GCM1
M04883_2.00
Homo sapiens
RTGSGGGBV

BVCCCSCAY
SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX
0.696 0.696
GCM1
M05868_2.00
Homo sapiens
ATGCGGGYV

BRCCCGCAT
SMiLE-seq
Isakova et al.(2017)
GCM1
0.696 0.696
GCM1
M10603_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMA_Q4
0.696 0.696
GCM1
M10604_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCM_Q2
0.696 0.696
GCM1
M04884_2.00
Homo sapiens
ATRNKGGYV

BRCCMNYAT
SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX
0.696 0.696
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.688 0.688
gcm2
M02026_2.00
Drosophila melanogaster
ATGCGGGY

RCCCGCAT
PBM
Weirauch et al.(2014)
pTH8361
0.667 0.667
gcm2
M03767_2.00
Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN

NATGCGGGYNNNRCCCGCATN
SELEX
Nitta et al.(2015)
gcm2_1
0.667 0.667
gcm2
M03768_2.00
Drosophila melanogaster
BATGCKGGTACCMGCATV

BATGCKGGTACCMGCATV
SELEX
Nitta et al.(2015)
gcm2_2
0.667 0.667
gcm
M03764_2.00
Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV

BATGCGGGYVBBRCCCGCATD
SELEX
Nitta et al.(2015)
gcm_1
0.652 0.652
gcm
M03765_2.00
Drosophila melanogaster
VATGCKGGYRCCMGCATV

BATGCKGGYRCCMGCATB
SELEX
Nitta et al.(2015)
gcm_2
0.652 0.652
gcm
M03766_2.00
Drosophila melanogaster
YATGCGGGTACCAGCATV

BATGCTGGTACCCGCATR
SELEX
Nitta et al.(2015)
gcm_3
0.652 0.652
gcm
M10605_2.00
Drosophila melanogaster
NDNATGCGGGYNB

VNRCCCGCATNHN
Transfac
Matys et al.(2006)
I$GCM_01
0.652 0.652
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000001492 GCM 38 175

Links

Other GCM family TFs
Other Felis catus TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_02688 Capronia coronata A1O1_02688 N 0.000
A1O3_05266 Capronia epimyces A1O3_05266 N 0.000
A1O5_01442 Cladophialophora psammophila A1O5_01442 N 0.000
A1O7_08334 Cladophialophora yegresii A1O7_08334 N 0.000
AB07208.1 Alternaria brassicicola AB07208.1 N 0.000
ACLA_016070 Aspergillus clavatus CADACLAG00000861 N 0.000
ACRE_022770 Acremonium chrysogenum ACRE_022770 N 0.000
AFUA_5G13080 Aspergillus fumigatus CADAFUAG00006036 N 0.000
AUEXF2481DRAFT_355500 Aureobasidium subglaciale AUEXF2481DRAFT_355500 N 0.000
BBA_02591 Beauveria bassiana BBA_02591 N 0.000
Bcin03g01100 Botrytis cinerea Bcin03g01100 N 0.000
CADAORAG00011561 Aspergillus oryzae CADAORAG00011561 N 0.000
CCM_03094 Cordyceps militaris CCM_03094 N 0.000
CFIO01_11426 Colletotrichum fioriniae CFIO01_11426 N 0.000
CGGC5_6062 Colletotrichum gloeosporioides CGGC5_6062 N 0.000
CH063_05999 Colletotrichum higginsianum CH063_05999 N 0.000
CHGG_02432 Chaetomium globosum CHGG_02432 N 0.000
CMQ_5876 Grosmannia clavigera CMQ_5876 N 0.000
Cob_11832 Colletotrichum orbiculare Cob_11832 N 0.000
COCC4DRAFT_183954 Bipolaris maydis COCC4DRAFT_183954 N 0.000
COCCADRAFT_89591 Bipolaris zeicola COCCADRAFT_89591 N 0.000
COCMIDRAFT_22048 Bipolaris oryzae COCMIDRAFT_22048 N 0.000
COCSADRAFT_130904 Bipolaris sorokiniana COCSADRAFT_130904 N 0.000
COCVIDRAFT_34721 Bipolaris victoriae COCVIDRAFT_34721 N 0.000
CPUR_02213 Claviceps purpurea CPUR_02213 N 0.000
CSUB01_00157 Colletotrichum sublineola CSUB01_00157 N 0.000
CTHT_0029190 Chaetomium thermophilum CTHT_0029190 N 0.000
EPUS_05767 Endocarpon pusillum EPUS_05767 N 0.000
estExt_fgenesh1_pg.C_chr_11192 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_11192 N 0.000
estExt_Genewise1.C_11835 Neurospora discreta estExt_Genewise1.C_11835 N 0.000
estExt_Genewise1.C_20573 Cochliobolus heterostrophus C5 estExt_Genewise1.C_20573 N 0.000
EURHEDRAFT_416038 Aspergillus ruber EURHEDRAFT_416038 N 0.000
e_gw1.00710.35.1 Aspergillus carbonarius e_gw1.00710.35.1 N 0.000
e_gw1.1.3574.1 Cryphonectria parasitica e_gw1.1.3574.1 N 0.000
F503_00183 Ophiostoma piceae uamh F503_00183 N 0.000
FFUJ_13348 Fusarium fujikuroi FFUJ_13348 N 0.000
FGRRES_20289 Fusarium graminearum FGRRES_20289 N 0.000
FOXG_07866 Fusarium oxysporum FOXG_07866 N 0.000
FPSE_00911 Fusarium pseudograminearum FPSE_00911 N 0.000
FVEG_04788 Fusarium verticillioides FVEG_04788 N 0.000
GGTG_02625 Gaeumannomyces graminis GGTG_02625 N 0.000
GLRG_03112 Colletotrichum graminicola GLRG_03112 N 0.000
GMDG_07180 Pseudogymnoascus destructans GMDG_07180 N 0.000
gw1.1.1306.1 Mycosphaerella fijiensis gw1.1.1306.1 N 0.000
gw1.6.94.1 Nectria haematococca gw1.6.94.1 N 0.000
HMPREF1624_04517 Sporothrix schenckii HMPREF1624_04517 N 0.000
LEMA_P044390.1 Leptosphaeria maculans LEMA_P044390.1 N 0.000
M437DRAFT_47906 Aureobasidium melanogenum M437DRAFT_47906 N 0.000
M438DRAFT_346556 Aureobasidium pullulans M438DRAFT_346556 N 0.000
MAC_02105 Metarhizium acridum MAC_02105 N 0.000
MAJ_05489 Metarhizium majus MAJ_05489 N 0.000
MAM_02243 Metarhizium album MAM_02243 N 0.000
MANI_002092 Metarhizium anisopliae MANI_002092 N 0.000
MBM_07053 Marssonina brunnea MBM_07053 N 0.000
MBR_07319 Metarhizium brunneum MBR_07319 N 0.000
MGG_07458 Magnaporthe oryzae MGG_07458 N 0.000
MGU_05987 Metarhizium guizhouense MGU_05987 N 0.000
MYCFIDRAFT_10858 Pseudocercospora fijiensis MYCFIDRAFT_10858 N 0.000
Mycgr3G107474 Zymoseptoria tritici Mycgr3G107474 N 0.000
MYCTH_2301100 Myceliophthora thermophila MYCTH_2301100 N 0.000
NCU09529 Neurospora crassa NCU09529 N 0.000
NechaG858 Fusarium solani NechaG858 N 0.000
NEUTE1DRAFT_75753 Neurospora tetrasperma NEUTE1DRAFT_75753 N 0.000
NFIA_073950 Neosartorya fischeri CADNFIAG00007563 N 0.000
OCS_02045 Ophiocordyceps sinensis OCS_02045 N 0.000
Pc21g08180 Penicillium chrysogenum Pc21g08180 N 0.000
PCH_Pc21g08180 Penicillium rubens PCH_Pc21g08180 N 0.000
PDE_07378 Penicillium oxalicum PDE_07378 N 0.000
PDIP_58830 Penicillium digitatum PDIP_58830 N 0.000
PEX1_060150 Penicillium expansum PEX1_060150 N 0.000
PFICI_07761 Pestalotiopsis fici PFICI_07761 N 0.000
PITC_074210 Penicillium italicum PITC_074210 N 0.000
PODANS_2_8520 Podospora anserina PODANS_2_8520 N 0.000
PTRG_06039 Pyrenophora triticirepentis PTRG_06039 N 0.000
PTT_08652 Pyrenophora teres PTT_08652 N 0.000
PV04_08874 Capronia semiimmersa PV04_08874 N 0.000
PV06_05084 Exophiala oligosperma PV06_05084 N 0.000
PV08_09110 Exophiala spinifera PV08_09110 N 0.000
PV09_02763 Verruconis gallopava PV09_02763 N 0.000
PV11_02440 Exophiala sideris PV11_02440 N 0.000
PVAR5_1770 Byssochlamys spectabilis PVAR5_1770 N 0.000
S40285_01658 Stachybotrys chlorohalonata S40285_01658 N 0.000
S40288_00446 Stachybotrys chartarum S40288_00446 N 0.000
SAPIO_CDS8865 Scedosporium apiospermum SAPIO_CDS8865 N 0.000
SBOR_3507 Sclerotinia borealis SBOR_3507 N 0.000
SEPMUDRAFT_17793 Sphaerulina musiva SEPMUDRAFT_17793 N 0.000
SETTUDRAFT_166687 Setosphaeria turcica SETTUDRAFT_166687 N 0.000
SNOG_07486 Stagonospora nodorum SNOG_07486 N 0.000
SNOG_07486 Phaeosphaeria nodorum SNOG_07486 N 0.000
SPBR_05600 Sporothrix brasiliensis SPBR_05600 N 0.000
SS1G_00787 Sclerotinia sclerotiorum SS1G_00787 N 0.000
THITE_2107310 Thielavia terrestris THITE_2107310 N 0.000
TRIATDRAFT_321925 Trichoderma atroviride TRIATDRAFT_321925 N 0.000
TRIREDRAFT_3449 Trichoderma reesei TRIREDRAFT_3449 N 0.000
TRIVIDRAFT_229241 Trichoderma virens TRIVIDRAFT_229241 N 0.000
U727_0043104031 Penicillium solitum U727_0043104031 N 0.000
V499_01680 Pseudogymnoascus pannorum V499_01680 N 0.000
VHEMI00945 Torrubiella hemipterigena VHEMI00945 N 0.000
X797_006673 Metarhizium robertsii X797_006673 N 0.000
Z518_05219 Rhinocladiella mackenziei Z518_05219 N 0.000