Gcm2 (Mus musculus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSMUSG00000021362 T198023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.928 0.928
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.928 0.928
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.928 0.928
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.928 0.928
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.855 0.855
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.819 0.819
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.812 0.812
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.703 0.703
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.703 0.703
XP_004449939.1
M02027_2.00
Dasypus novemcinctus
RTRSGGGY

RCCCSYAY
PBM
Weirauch et al.(2014)
pTH9259
0.703 0.703
GCM1
M02020_2.00
Homo sapiens
NVTVNGGGN

NCCCNBABN
PBM
Weirauch et al.(2014)
pTH7965
0.696 0.696
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.696 0.696
GCM1
M03068_2.00
Homo sapiens
BATGCGGGTR

YACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_1
0.696 0.696
GCM1
M03069_2.00
Homo sapiens
RTRYKGGYRCCMGYAN

NTRCKGGYRCCMRYAY
SELEX
Jolma et al.(2013)
GCM1_2
0.696 0.696
GCM1
M03070_2.00
Homo sapiens
BATGCGGGTRS

SYACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_3
0.696 0.696
GCM1
M04883_2.00
Homo sapiens
RTGSGGGBV

BVCCCSCAY
SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX
0.696 0.696
GCM1
M05868_2.00
Homo sapiens
ATGCGGGYV

BRCCCGCAT
SMiLE-seq
Isakova et al.(2017)
GCM1
0.696 0.696
GCM1
M10603_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMA_Q4
0.696 0.696
GCM1
M10604_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCM_Q2
0.696 0.696
GCM1
M04884_2.00
Homo sapiens
ATRNKGGYV

BRCCMNYAT
SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX
0.696 0.696
gcm2
M02026_2.00
Drosophila melanogaster
ATGCGGGY

RCCCGCAT
PBM
Weirauch et al.(2014)
pTH8361
0.667 0.667
gcm2
M03767_2.00
Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN

NATGCGGGYNNNRCCCGCATN
SELEX
Nitta et al.(2015)
gcm2_1
0.667 0.667
gcm2
M03768_2.00
Drosophila melanogaster
BATGCKGGTACCMGCATV

BATGCKGGTACCMGCATV
SELEX
Nitta et al.(2015)
gcm2_2
0.667 0.667
gcm
M03764_2.00
Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV

BATGCGGGYVBBRCCCGCATD
SELEX
Nitta et al.(2015)
gcm_1
0.652 0.652
gcm
M03765_2.00
Drosophila melanogaster
VATGCKGGYRCCMGCATV

BATGCKGGYRCCMGCATB
SELEX
Nitta et al.(2015)
gcm_2
0.652 0.652
gcm
M03766_2.00
Drosophila melanogaster
YATGCGGGTACCAGCATV

BATGCTGGTACCCGCATR
SELEX
Nitta et al.(2015)
gcm_3
0.652 0.652
gcm
M10605_2.00
Drosophila melanogaster
NDNATGCGGGYNB

VNRCCCGCATNHN
Transfac
Matys et al.(2006)
I$GCM_01
0.652 0.652
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000021791 GCM 35 172

Links

Other GCM family TFs
Other Mus musculus TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000623 Aedes aegypti AAEL000623 I 0.688
AAEL000631 Aedes aegypti AAEL000631 I 0.614
AALB008012 Anopheles albimanus AALB008012 I 0.645
AALB008013 Anopheles albimanus AALB008013 I 0.674
Aan_R001196 Calypte anna Aan_R001196 I 0.696
Aan_R001550 Calypte anna Aan_R001550 I 0.862
AARA011979 Anopheles arabiensis AARA011979 I 0.616
AARA011980 Anopheles arabiensis AARA011980 I 0.667
AATE008476 Anopheles atroparvus AATE008476 I 0.667
AATE020589 Anopheles atroparvus AATE020589 I 0.614
ACEP23384 Atta cephalotes ACEP23384 I 0.636
ACHR001414 Anopheles christyi ACHR001414 I 0.671
ACOM031025 Anopheles coluzzii ACOM031025 I 0.644
ACOM031032 Anopheles coluzzii ACOM031032 I 0.616
ACUA009622 Anopheles culicifacies ACUA009622 I 0.664
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.659
ADAC002327 Anopheles darlingi ADAC002327 I 0.657
ADIR000711 Anopheles dirus ADIR000711 I 0.674
AEPI007160 Anopheles epiroticus AEPI007160 I 0.671
AEPI007161 Anopheles epiroticus AEPI007161 I 0.616
AFAF000663 Anopheles farauti AFAF000663 I 0.616
AFAF005680 Anopheles farauti AFAF005680 I 0.667
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.703
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.855
AFUN009837 Anopheles funestus AFUN009837 I 0.674
AGAP007782 Anopheles gambiae AGAP007782 I 0.616
AGAP007783 Anopheles gambiae AGAP007783 I 0.674
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.819
AMAM003661 Anopheles maculatus AMAM003661 I 0.674
AMAM005757 Anopheles maculatus AMAM005757 I 0.651
AMEC020313 Anopheles melas AMEC020313 I 0.643
AMEM005966 Anopheles merus AMEM005966 I 0.644
AMEM008520 Anopheles merus AMEM008520 I 0.616
AMIN006368 Anopheles minimus AMIN006368 I 0.674
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.616
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.674
ASIS002985 Anopheles sinensis ASIS002985 I 0.667
ASIS021139 Anopheles sinensis ASIS021139 I 0.630
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.674
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.616
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.681
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.696
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.841
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.638
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.681
CLEC013329 Cimex lectularius CLEC013329 I 0.643
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.855
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.650
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.650
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.638
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.935
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.688
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.841
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.848
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.696
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.688
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.717
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.942
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.696
ENSETEG00000005181 Echinops telfairi ENSETEG00000005181 I 0.616
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.696
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.848
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.797
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.688
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.833
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.826
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.674
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.696
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.674
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.928
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.935
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.688
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.949
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.696
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.688
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.906
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.826
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.696
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.942
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.928
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.935
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.812
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.746
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.935
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.696
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.862
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.703
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.870
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.696
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.688
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.920
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.630
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.688
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.696
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.703
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.819
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.717
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.913
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.819
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.643
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.636
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.652
GB45031 Apis mellifera GB45031 I 0.636
gcm Drosophila melanogaster FBgn0014179 D 0.652
GCM1 Equus caballus ENSECAG00000014228 I 0.696
GCM1 Felis catus ENSFCAG00000009490 I 0.688
GCM1 Homo sapiens ENSG00000137270 D 0.696
GCM1 Gallus gallus ENSGALG00000016316 I 0.696
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.696
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.688
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.688
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.696
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.688
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.696
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.696
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.710
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.681
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.703
Gcm1 Mus musculus ENSMUSG00000023333 D 0.703
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.688
GCM1 Canis familiaris ENSCAFG00000002273 I 0.688
GCM1 Bos taurus ENSBTAG00000008148 I 0.688
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.696
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.703
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.696
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.667
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.696
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.674
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.928
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.942
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.928
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.877
GCM2 Felis catus ENSFCAG00000001608 I 0.942
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.819
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.841
GCM2 Echinops telfairi ENSETEG00000012473 I 0.881
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.899
GCM2 Equus caballus ENSECAG00000017632 I 0.928
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.928
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.935
GCM2 Bos taurus ENSBTAG00000018787 I 0.920
gcm2 Danio rerio ENSDARG00000045413 I 0.833
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.928
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.928
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.920
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.826
GCM2 Gallus gallus ENSGALG00000012768 I 0.833
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.819
GCM2 Canis familiaris ENSCAFG00000009747 I 0.935
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.812
GCM2 Homo sapiens ENSG00000124827 D 0.928
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.906
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.913
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.906
gcm2 Drosophila melanogaster FBgn0019809 D 0.667
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.928
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.812
gcm2 Oryzias latipes ENSORLG00000019715 I 0.812
GCM2 Procavia capensis ENSPCAG00000011887 I 0.855
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.928
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.855
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.920
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.906
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.993
gcm2.S Xenopus laevis XB-GENE-866131 I 0.812
GD22349 Drosophila simulans FBgn0193756 I 0.630
GE10457 Drosophila yakuba FBgn0228318 I 0.645
GE18856 Drosophila yakuba FBgn0236239 I 0.657
GF21907 Drosophila ananassae FBgn0098907 I 0.652
GF22779 Drosophila ananassae FBgn0099773 I 0.667
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.855
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.696
GG10041 Drosophila erecta FBgn0102353 I 0.667
GG24019 Drosophila erecta FBgn0116158 I 0.636
GH10675 Drosophila grimshawi FBgn0118156 I 0.645
GH11056 Drosophila grimshawi FBgn0118537 I 0.629
GI11073 Drosophila mojavensis FBgn0133835 I 0.650
GI17574 Drosophila mojavensis FBgn0140318 I 0.638
GJ17916 Drosophila virilis FBgn0205084 I 0.638
GJ18313 Drosophila virilis FBgn0205472 I 0.659
GK23810 Drosophila willistoni FBgn0225772 I 0.630
GK23867 Drosophila willistoni FBgn0225829 I 0.638
GL18919 Drosophila persimilis FBgn0156520 I 0.652
GL19218 Drosophila persimilis FBgn0156817 I 0.636
GM12386 Drosophila sechellia FBgn0167323 I 0.652
GM17569 Drosophila sechellia FBgn0172477 I 0.650
HMEL005671 Heliconius melpomene HMEL005671 I 0.681
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.629
ISCW022914 Ixodes scapularis ISCW022914 I 0.638
KGM_05743 Danaus plexippus KGM_05743 I 0.671
L798_07938 Zootermopsis nevadensis L798_07938 I 0.645
LCUP008083 Lucilia cuprina LCUP008083 I 0.652
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.667
LotgiG112320 Lottia gigantea LotgiG112320 I 0.616
MCINX011946 Melitaea cinxia MCINX011946 I 0.681
MDOA003644 Musca domestica MDOA003644 I 0.652
MDOA004732 Musca domestica MDOA004732 I 0.652
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.688
NV17454 Nasonia vitripennis NV17454 I 0.623
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.674
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.703
PHUM436840 Pediculus humanus PHUM436840 I 0.652
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.652
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.710
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.826
RPRC001299 Rhodnius prolixus RPRC001299 I 0.643
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.623
SINV21711 Solenopsis invicta SINV21711 I 0.645
Tal_R009935 Tyto alba Tal_R009935 I 0.696
Tal_R009965 Tyto alba Tal_R009965 I 0.650
TC014730 Tribolium castaneum TC014730 I 0.664
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.650
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.703
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.667