ENSSHAG00000015905 (Sarcophilus harrisii)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSSHAG00000015905 T198057_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.964 0.964
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.957 0.957
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.942 0.942
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.942 0.942
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.942 0.942
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.942 0.942
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.942 0.942
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.942 0.942
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.942 0.942
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.942 0.942
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.942 0.942
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.913 0.913
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.899 0.899
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.754 0.754
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.725 0.725
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.710 0.710
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.703 0.703
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.703 0.703
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.703 0.703
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.703 0.703
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.616 0.616
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.616 0.616
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.616 0.616
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000018734 GCM 32 169

Links

Other GCM family TFs
Other Sarcophilus harrisii TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.993
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.986
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.964
GCM1 Felis catus ENSFCAG00000009490 I 0.964
GCM1 Canis familiaris ENSCAFG00000002273 I 0.964
Gcm1 Mus musculus ENSMUSG00000023333 D 0.964
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.957
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.957
GCM1 Equus caballus ENSECAG00000014228 I 0.949
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.942
GCM1 Homo sapiens ENSG00000137270 D 0.942
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.942
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.942
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.942
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.942
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.942
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.942
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.942
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.942
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.941
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.935
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.935
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.926
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.925
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.920
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.920
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.920
GCM1 Bos taurus ENSBTAG00000008148 I 0.920
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.920
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.920
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.920
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.920
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.915
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.913
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.913
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.913
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.913
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.906
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.906
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.899
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.899
Aan_R001196 Calypte anna Aan_R001196 I 0.899
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.899
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.895
GCM1 Gallus gallus ENSGALG00000016316 I 0.891
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.884
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.884
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.884
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.877
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.877
Tal_R009935 Tyto alba Tal_R009935 I 0.877
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.877
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.873
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.833
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.808
ENSETEG00000005181 Echinops telfairi ENSETEG00000005181 I 0.797
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.783
gcm2 Danio rerio ENSDARG00000045413 I 0.761
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.761
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.754
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.754
Aan_R001550 Calypte anna Aan_R001550 I 0.754
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.754
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.754
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.754
GCM2 Gallus gallus ENSGALG00000012768 I 0.754
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.754
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.754
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.739
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.738
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.733
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.732
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.732
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.732
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.732
gcm2.S Xenopus laevis XB-GENE-866131 I 0.732
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.725
gcm2 Oryzias latipes ENSORLG00000019715 I 0.725
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.725
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.725
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.725
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.725
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.717
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.717
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.717
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.717
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.717
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.717
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.717
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.710
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.710
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.710
GCM2 Bos taurus ENSBTAG00000018787 I 0.710
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.710
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.710
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.710
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.710
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.703
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.703
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.703
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.703
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.703
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.703
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.703
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.703
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.703
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.703
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.703
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.703
GCM2 Homo sapiens ENSG00000124827 D 0.703
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.696
Gcm2 Mus musculus ENSMUSG00000021362 I 0.696
GCM2 Canis familiaris ENSCAFG00000009747 I 0.696
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.696
GCM2 Felis catus ENSFCAG00000001608 I 0.696
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.696
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.688
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.688
GCM2 Equus caballus ENSECAG00000017632 I 0.688
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.688
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.688
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.688
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.681
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.681
SMAR010130 Strigamia maritima SMAR010130 I 0.678
GCM2 Procavia capensis ENSPCAG00000011887 I 0.674
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.674
GCM2 Echinops telfairi ENSETEG00000012473 I 0.669
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.667
gw.943.3.1 Branchiostoma floridae gw.943.3.1 I 0.661
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.659
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.636
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.636
CapteG133139 Capitella teleta CapteG133139 I 0.632
AFUN009837 Anopheles funestus AFUN009837 I 0.629
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.629
AAEL000623 Aedes aegypti AAEL000623 I 0.629
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.623
AFAF005680 Anopheles farauti AFAF005680 I 0.623
AEPI007160 Anopheles epiroticus AEPI007160 I 0.621
ACUA009622 Anopheles culicifacies ACUA009622 I 0.621
ACOM031025 Anopheles coluzzii ACOM031025 I 0.621
AGAP007783 Anopheles gambiae AGAP007783 I 0.621
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.621
AMIN006368 Anopheles minimus AMIN006368 I 0.621
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.621
AMEM005966 Anopheles merus AMEM005966 I 0.621
AMAM003661 Anopheles maculatus AMAM003661 I 0.621
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.621
ACHR001414 Anopheles christyi ACHR001414 I 0.621
ADIR000711 Anopheles dirus ADIR000711 I 0.614
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.614
MCINX011946 Melitaea cinxia MCINX011946 I 0.614
KGM_05743 Danaus plexippus KGM_05743 I 0.614
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.614
HMEL005671 Heliconius melpomene HMEL005671 I 0.614
AARA011980 Anopheles arabiensis AARA011980 I 0.614
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.614
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.614
TC014730 Tribolium castaneum TC014730 I 0.614
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.614
GE18856 Drosophila yakuba FBgn0236239 I 0.614
ISCW022914 Ixodes scapularis ISCW022914 I 0.609