ENSSTOG00000014763 (Ictidomys tridecemlineatus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSSTOG00000014763 T198060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.904 0.904
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.812 0.812
XP_004449939.1
M02027_2.00
Dasypus novemcinctus
RTRSGGGY

RCCCSYAY
PBM
Weirauch et al.(2014)
pTH9259
0.812 0.812
GCM1
M02020_2.00
Homo sapiens
NVTVNGGGN

NCCCNBABN
PBM
Weirauch et al.(2014)
pTH7965
0.797 0.797
GCM1
M03068_2.00
Homo sapiens
BATGCGGGTR

YACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_1
0.797 0.797
GCM1
M03069_2.00
Homo sapiens
RTRYKGGYRCCMGYAN

NTRCKGGYRCCMRYAY
SELEX
Jolma et al.(2013)
GCM1_2
0.868 0.868
GCM1
M03070_2.00
Homo sapiens
BATGCGGGTRS

SYACCCGCATV
SELEX
Jolma et al.(2013)
GCM1_3
0.868 0.868
GCM1
M04883_2.00
Homo sapiens
RTGSGGGBV

BVCCCSCAY
SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX
0.868 0.868
GCM1
M05868_2.00
Homo sapiens
ATGCGGGYV

BRCCCGCAT
SMiLE-seq
Isakova et al.(2017)
GCM1
0.868 0.868
GCM1
M10603_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMA_Q4
0.797 0.797
GCM1
M10604_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCM_Q2
0.797 0.797
GCM1
M04884_2.00
Homo sapiens
ATRNKGGYV

BRCCMNYAT
SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX
0.797 0.797
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.768 0.768
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.719 0.719
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.693 0.693
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.638 0.638
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.675 0.675
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.623 0.623
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.623 0.623
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.623 0.623
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000013224 GCM 30 143
ENSSTOP00000020647 GCM 30 167

Links

Other GCM family TFs
Other Ictidomys tridecemlineatus TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSSTOG00000022342 Ictidomys tridecemlineatus ENSSTOG00000022342 I 0.947
GCM1 Choloepus hoffmanni ENSCHOG00000003116 I 0.925
GCM1 Tupaia belangeri ENSTBEG00000007899 I 0.912
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.895
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.895
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.895
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.895
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.895
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.886
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.886
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.877
GCM1 Felis catus ENSFCAG00000009490 I 0.877
GCM1 Canis familiaris ENSCAFG00000002273 I 0.877
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.873
GCM1 Homo sapiens ENSG00000137270 D 0.868
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.868
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.868
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.868
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.868
GCM1 Vicugna pacos ENSVPAG00000006379 I 0.868
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.868
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.868
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.868
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.868
ENSSSCG00000002630 Sus scrofa ENSSSCG00000002630 I 0.868
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.868
ENSMICG00000002274 Microcebus murinus ENSMICG00000002274 I 0.860
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.860
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.860
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.860
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.860
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.860
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.851
Aan_R001196 Calypte anna Aan_R001196 I 0.851
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.851
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.851
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.851
Alligator_sinensis_CCG000160.1 Alligator sinensis Alligator_sinensis_CCG000160.1 I 0.842
GCM1 Gallus gallus ENSGALG00000016316 I 0.842
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.833
Tal_R009935 Tyto alba Tal_R009935 I 0.825
Gcm1 Mus musculus ENSMUSG00000023333 D 0.819
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.812
GCM1 Bos taurus ENSBTAG00000008148 I 0.804
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.804
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.804
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.804
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.804
GCM1 Equus caballus ENSECAG00000014228 I 0.797
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.785
ENSETEG00000005181 Echinops telfairi ENSETEG00000005181 I 0.781
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.775
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.768
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.768
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.761
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.746
gcm2 Danio rerio ENSDARG00000045413 I 0.746
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.739
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.737
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.729
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.728
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.719
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.719
Aan_R001550 Calypte anna Aan_R001550 I 0.719
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.719
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.719
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.719
GCM2 Gallus gallus ENSGALG00000012768 I 0.719
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.719
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.719
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.719
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.711
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.711
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.711
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.711
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.702
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.702
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.702
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.702
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.693
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.693
gcm2.S Xenopus laevis XB-GENE-866131 I 0.693
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.693
gcm2 Oryzias latipes ENSORLG00000019715 I 0.693
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.693
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.684
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.684
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.684
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.684
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.684
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.684
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.684
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.675
GCM2 Homo sapiens ENSG00000124827 D 0.675
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.675
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.675
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.675
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.675
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.675
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.675
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.675
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.675
GCM2 Bos taurus ENSBTAG00000018787 I 0.675
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.675
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.674
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.667
GCM2 Felis catus ENSFCAG00000001608 I 0.667
GCM2 Canis familiaris ENSCAFG00000009747 I 0.667
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.667
GCM2 Equus caballus ENSECAG00000017632 I 0.667
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.667
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.667
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.659
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.658
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.658
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.658
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.658
GCM2 Echinops telfairi ENSETEG00000012473 I 0.653
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.649
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.649
GCM2 Procavia capensis ENSPCAG00000011887 I 0.640
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.638
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.632
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.630
Gcm2 Mus musculus ENSMUSG00000021362 I 0.630
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.630
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.630
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.629
AAEL000623 Aedes aegypti AAEL000623 I 0.623
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.623
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.623