ENSTRUG00000001670 (Takifugu rubripes)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSTRUG00000001670 T198067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		1.000 1.000
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.983 0.983
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.879 0.879
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.853 0.853
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.853 0.853
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.853 0.853
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.853 0.853
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.741 0.741
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.741 0.741
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.741 0.741
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.733 0.733
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.716 0.716
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.716 0.716
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.716 0.716
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.716 0.716
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.716 0.716
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.716 0.716
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.716 0.716
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.716 0.716
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.716 0.716
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.690 0.690
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.690 0.690
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.690 0.690
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.690 0.690
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.655 0.655
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.655 0.655
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.655 0.655
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000003828 GCM 1 116

Links

Other GCM family TFs
Other Takifugu rubripes TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 1.000
gcm2 Danio rerio ENSDARG00000045413 I 0.940
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.905
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.897
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.879
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.879
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.879
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.879
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.871
GCM2 Gallus gallus ENSGALG00000012768 I 0.871
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.871
GCM2 Felis catus ENSFCAG00000001608 I 0.862
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.862
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.862
GCM2 Equus caballus ENSECAG00000017632 I 0.853
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.853
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.853
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.845
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.845
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.845
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.845
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.836
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.828
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.826
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.819
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.812
gcm2 Oryzias latipes ENSORLG00000019715 I 0.812
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.810
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.802
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.790
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.790
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.775
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.761
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.754
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.746
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.741
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.741
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.741
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.741
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.739
Aan_R001550 Calypte anna Aan_R001550 I 0.739
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.739
gcm2.S Xenopus laevis XB-GENE-866131 I 0.739
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.739
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.739
Aan_R001196 Calypte anna Aan_R001196 I 0.733
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.733
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.733
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.733
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.733
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.732
GCM2 Canis familiaris ENSCAFG00000009747 I 0.732
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.729
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.725
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.725
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.725
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.725
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.725
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.725
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.725
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.724
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.717
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.717
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.717
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.717
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.717
GCM2 Bos taurus ENSBTAG00000018787 I 0.717
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.717
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.717
GCM2 Homo sapiens ENSG00000124827 D 0.717
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.717
AGAP007783 Anopheles gambiae AGAP007783 I 0.716
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.716
HMEL005671 Heliconius melpomene HMEL005671 I 0.716
L798_07938 Zootermopsis nevadensis L798_07938 I 0.716
AMIN006368 Anopheles minimus AMIN006368 I 0.716
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.716
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.710
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.710
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.710
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.710
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.707
AFAF005680 Anopheles farauti AFAF005680 I 0.707
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.707
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.707
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.706
Gcm2 Mus musculus ENSMUSG00000021362 I 0.703
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.703
GCM2 Procavia capensis ENSPCAG00000011887 I 0.703
Gcm1 Dipodomys ordii ENSDORG00000003627 I 0.698
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.696
SMAR010130 Strigamia maritima SMAR010130 I 0.695
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.692
AALB008013 Anopheles albimanus AALB008013 I 0.690
GM12386 Drosophila sechellia FBgn0167323 I 0.690
NV17454 Nasonia vitripennis NV17454 I 0.690
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.690
gcm Drosophila melanogaster FBgn0014179 D 0.690
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.681
GI17574 Drosophila mojavensis FBgn0140318 I 0.681
GJ17916 Drosophila virilis FBgn0205084 I 0.681
ISCW022914 Ixodes scapularis ISCW022914 I 0.672
GK23810 Drosophila willistoni FBgn0225772 I 0.672
ACOM031032 Anopheles coluzzii ACOM031032 I 0.664
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.664
AEPI007161 Anopheles epiroticus AEPI007161 I 0.664
AARA011979 Anopheles arabiensis AARA011979 I 0.664
AMEM008520 Anopheles merus AMEM008520 I 0.664
AGAP007782 Anopheles gambiae AGAP007782 I 0.664
GCM2 Echinops telfairi ENSETEG00000012473 I 0.661
AMAM005757 Anopheles maculatus AMAM005757 I 0.661
GJ18313 Drosophila virilis FBgn0205472 I 0.655
GG10041 Drosophila erecta FBgn0102353 I 0.655
AALB008012 Anopheles albimanus AALB008012 I 0.655
gcm2 Drosophila melanogaster FBgn0019809 D 0.655
GF22779 Drosophila ananassae FBgn0099773 I 0.655
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.652
GK23867 Drosophila willistoni FBgn0225829 I 0.638
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.636
ENSSTOG00000014763 Ictidomys tridecemlineatus ENSSTOG00000014763 I 0.629
Gcm1 Mus musculus ENSMUSG00000023333 D 0.623
GCM1 Equus caballus ENSECAG00000014228 I 0.623
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.616
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.616
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.616
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.616
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.616
Tal_R009935 Tyto alba Tal_R009935 I 0.616
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.616
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.616
GCM1 Gallus gallus ENSGALG00000016316 I 0.616
GCM1 Canis familiaris ENSCAFG00000002273 I 0.609
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.609
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.609
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.609
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.609
GCM1 Felis catus ENSFCAG00000009490 I 0.609