gcm2 (Drosophila melanogaster)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 FBgn0019809 T198077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm2
M02026_2.00		 Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361		 (Direct) (Direct)
gcm2
M03767_2.00		 Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1		 (Direct) (Direct)
gcm2
M03768_2.00		 Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.714 0.714
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.714 0.714
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.714 0.714
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.714 0.714
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.679 0.679
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.679 0.679
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.679 0.679
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.679 0.679
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.650 0.650
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.643 0.643
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.636 0.636
For this family, TFs with SR scores > 0.607 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02026_2.00 GCM 52 192

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0079435 GCM 82 222

Links

Other GCM family TFs
Other Drosophila melanogaster TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GG10041 Drosophila erecta FBgn0102353 I 1.000
GF22779 Drosophila ananassae FBgn0099773 I 1.000
GM17569 Drosophila sechellia FBgn0172477 I 0.993
GE18856 Drosophila yakuba FBgn0236239 I 0.993
GL18919 Drosophila persimilis FBgn0156520 I 0.964
GJ18313 Drosophila virilis FBgn0205472 I 0.964
GI11073 Drosophila mojavensis FBgn0133835 I 0.964
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.964
GK23867 Drosophila willistoni FBgn0225829 I 0.957
GH10675 Drosophila grimshawi FBgn0118156 I 0.957
LCUP008083 Lucilia cuprina LCUP008083 I 0.914
MDOA003644 Musca domestica MDOA003644 I 0.914
ACOM031025 Anopheles coluzzii ACOM031025 I 0.805
AMEM005966 Anopheles merus AMEM005966 I 0.805
AEPI007160 Anopheles epiroticus AEPI007160 I 0.786
AFUN009837 Anopheles funestus AFUN009837 I 0.786
ADIR000711 Anopheles dirus ADIR000711 I 0.786
ACHR001414 Anopheles christyi ACHR001414 I 0.779
ACUA009622 Anopheles culicifacies ACUA009622 I 0.779
AMIN006368 Anopheles minimus AMIN006368 I 0.779
AGAP007783 Anopheles gambiae AGAP007783 I 0.779
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.779
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.779
AMAM003661 Anopheles maculatus AMAM003661 I 0.779
AARA011980 Anopheles arabiensis AARA011980 I 0.771
AMEC020313 Anopheles melas AMEC020313 I 0.771
AFAF005680 Anopheles farauti AFAF005680 I 0.771
ASIS002985 Anopheles sinensis ASIS002985 I 0.764
AAEL000623 Aedes aegypti AAEL000623 I 0.764
AALB008013 Anopheles albimanus AALB008013 I 0.757
ADAC002327 Anopheles darlingi ADAC002327 I 0.757
AATE008476 Anopheles atroparvus AATE008476 I 0.757
GJ17916 Drosophila virilis FBgn0205084 I 0.736
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.736
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.736
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.736
MDOA004732 Musca domestica MDOA004732 I 0.729
GI17574 Drosophila mojavensis FBgn0140318 I 0.729
GH11056 Drosophila grimshawi FBgn0118537 I 0.721
TC014730 Tribolium castaneum TC014730 I 0.721
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.721
AMAM005757 Anopheles maculatus AMAM005757 I 0.716
GF21907 Drosophila ananassae FBgn0098907 I 0.714
gcm Drosophila melanogaster FBgn0014179 D 0.714
AALB008012 Anopheles albimanus AALB008012 I 0.714
AAEL000631 Aedes aegypti AAEL000631 I 0.714
KGM_05743 Danaus plexippus KGM_05743 I 0.714
MCINX011946 Melitaea cinxia MCINX011946 I 0.714
HMEL005671 Heliconius melpomene HMEL005671 I 0.714
GE10457 Drosophila yakuba FBgn0228318 I 0.714
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.714
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.714
GM12386 Drosophila sechellia FBgn0167323 I 0.714
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.707
GL19218 Drosophila persimilis FBgn0156817 I 0.707
GG24019 Drosophila erecta FBgn0116158 I 0.707
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.700
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.700
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.700
CLEC013329 Cimex lectularius CLEC013329 I 0.700
AATE020589 Anopheles atroparvus AATE020589 I 0.700
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.700
ASIS021139 Anopheles sinensis ASIS021139 I 0.700
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.700
L798_07938 Zootermopsis nevadensis L798_07938 I 0.700
SMAR010130 Strigamia maritima SMAR010130 I 0.695
AEPI007161 Anopheles epiroticus AEPI007161 I 0.693
ADIR000710 Anopheles dirus ADIR000710 I 0.693
AFAF000663 Anopheles farauti AFAF000663 I 0.693
AFUN009836 Anopheles funestus AFUN009836 I 0.693
AMEM008520 Anopheles merus AMEM008520 I 0.693
ACOM031032 Anopheles coluzzii ACOM031032 I 0.693
ACHR004082 Anopheles christyi ACHR004082 I 0.693
PHUM436840 Pediculus humanus PHUM436840 I 0.693
RPRC001299 Rhodnius prolixus RPRC001299 I 0.693
AARA011979 Anopheles arabiensis AARA011979 I 0.693
GB45031 Apis mellifera GB45031 I 0.693
GK23810 Drosophila willistoni FBgn0225772 I 0.693
AMIN006367 Anopheles minimus AMIN006367 I 0.693
ACUA018162 Anopheles culicifacies ACUA018162 I 0.693
AGAP007782 Anopheles gambiae AGAP007782 I 0.693
ACEP23384 Atta cephalotes ACEP23384 I 0.693
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.693
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.693
gw.285.88.1 Branchiostoma floridae gw.285.88.1 I 0.692
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.688
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.688
GCM2 Homo sapiens ENSG00000124827 D 0.688
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.688
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.686
SINV21711 Solenopsis invicta SINV21711 I 0.686
GCM2 Echinops telfairi ENSETEG00000012473 I 0.686
GD22349 Drosophila simulans FBgn0193756 I 0.686
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.681
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.681
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.681
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.681
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.679
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.679
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.679
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.674
GCM2 Canis familiaris ENSCAFG00000009747 I 0.674
GCM2 Bos taurus ENSBTAG00000018787 I 0.674
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.674
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.674
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.671
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.667
gcm2 Danio rerio ENSDARG00000045413 I 0.667
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.667
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.667
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.667
Gcm2 Mus musculus ENSMUSG00000021362 I 0.667
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.667
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.667
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.667
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.667
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.667
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.667
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.667
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.664
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.664
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.664
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.664
NV17454 Nasonia vitripennis NV17454 I 0.664
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.664
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.659
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.659
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.659
gcm2.S Xenopus laevis XB-GENE-866131 I 0.659
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.659
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.659
Aan_R001550 Calypte anna Aan_R001550 I 0.659
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.659
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.659
gcm2 Oryzias latipes ENSORLG00000019715 I 0.659
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.659
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.659
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.659
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.659
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.659
GCM2 Felis catus ENSFCAG00000001608 I 0.657
ISCW022914 Ixodes scapularis ISCW022914 I 0.657
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.657
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.657
GCM2 Equus caballus ENSECAG00000017632 I 0.657
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.657
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.657
ENSTRUG00000001670 Takifugu rubripes ENSTRUG00000001670 I 0.655
CapteG133139 Capitella teleta CapteG133139 I 0.654
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.652
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.652
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.652
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.650
GCM2 Procavia capensis ENSPCAG00000011887 I 0.645
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.645
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.645
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.645
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.643
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.643
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.643
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.643
GCM2 Gallus gallus ENSGALG00000012768 I 0.643
HelroG145480 Helobdella robusta HelroG145480 I 0.638
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.636
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.636
LotgiG112320 Lottia gigantea LotgiG112320 I 0.636
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.630
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.630
GCM1 Ochotona princeps ENSOPRG00000003290 I 0.627
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.623
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.623
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.623
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.621
Ogr12931 Ophisaurus gracilis Ogr12931 I 0.621
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.621
ENSACAG00000008561 Anolis carolinensis ENSACAG00000008561 I 0.619
Gcm1 Mus musculus ENSMUSG00000023333 D 0.616
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.616
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.616
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.609
Tal_R009935 Tyto alba Tal_R009935 I 0.609
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.609
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.609
Aan_R001196 Calypte anna Aan_R001196 I 0.609
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.609
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.609
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.609