GH11056 (Drosophila grimshawi)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 FBgn0118537 T198085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.893 0.893
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.893 0.893
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.893 0.893
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.893 0.893
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.721 0.721
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.721 0.721
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.721 0.721
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.650 0.650
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.643 0.643
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.643 0.643
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.643 0.643
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.643 0.643
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.629 0.629
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.614 0.614
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0144962 GCM 42 181

Links

Other GCM family TFs
Other Drosophila grimshawi TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GJ17916 Drosophila virilis FBgn0205084 I 0.964
GI17574 Drosophila mojavensis FBgn0140318 I 0.957
GL19218 Drosophila persimilis FBgn0156817 I 0.914
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.914
GF21907 Drosophila ananassae FBgn0098907 I 0.907
gcm Drosophila melanogaster FBgn0014179 D 0.893
GM12386 Drosophila sechellia FBgn0167323 I 0.893
GE10457 Drosophila yakuba FBgn0228318 I 0.893
GG24019 Drosophila erecta FBgn0116158 I 0.886
GK23810 Drosophila willistoni FBgn0225772 I 0.879
MDOA004732 Musca domestica MDOA004732 I 0.879
GD22349 Drosophila simulans FBgn0193756 I 0.857
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.779
ACUA009622 Anopheles culicifacies ACUA009622 I 0.764
ADIR000711 Anopheles dirus ADIR000711 I 0.764
ACHR001414 Anopheles christyi ACHR001414 I 0.764
AGAP007783 Anopheles gambiae AGAP007783 I 0.764
AMIN006368 Anopheles minimus AMIN006368 I 0.764
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.764
AMAM003661 Anopheles maculatus AMAM003661 I 0.764
AFAF005680 Anopheles farauti AFAF005680 I 0.764
AFUN009837 Anopheles funestus AFUN009837 I 0.764
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.764
AEPI007160 Anopheles epiroticus AEPI007160 I 0.757
AARA011980 Anopheles arabiensis AARA011980 I 0.757
ASIS002985 Anopheles sinensis ASIS002985 I 0.757
AAEL000623 Aedes aegypti AAEL000623 I 0.757
CLEC013329 Cimex lectularius CLEC013329 I 0.757
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.750
AALB008013 Anopheles albimanus AALB008013 I 0.750
ADAC002327 Anopheles darlingi ADAC002327 I 0.750
AMEC020313 Anopheles melas AMEC020313 I 0.743
TC014730 Tribolium castaneum TC014730 I 0.743
RPRC001299 Rhodnius prolixus RPRC001299 I 0.743
AATE008476 Anopheles atroparvus AATE008476 I 0.743
AAEL000631 Aedes aegypti AAEL000631 I 0.736
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.736
PHUM436840 Pediculus humanus PHUM436840 I 0.736
L798_07938 Zootermopsis nevadensis L798_07938 I 0.736
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.729
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.729
SINV21711 Solenopsis invicta SINV21711 I 0.729
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.729
GG10041 Drosophila erecta FBgn0102353 I 0.721
GF22779 Drosophila ananassae FBgn0099773 I 0.721
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.721
gcm2 Drosophila melanogaster FBgn0019809 D 0.721
GH10675 Drosophila grimshawi FBgn0118156 I 0.721
GM17569 Drosophila sechellia FBgn0172477 I 0.721
GB45031 Apis mellifera GB45031 I 0.721
HMEL005671 Heliconius melpomene HMEL005671 I 0.721
KGM_05743 Danaus plexippus KGM_05743 I 0.721
MCINX011946 Melitaea cinxia MCINX011946 I 0.721
GE18856 Drosophila yakuba FBgn0236239 I 0.721
GL18919 Drosophila persimilis FBgn0156520 I 0.721
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.721
ACEP23384 Atta cephalotes ACEP23384 I 0.721
AMAM005757 Anopheles maculatus AMAM005757 I 0.716
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.714
GI11073 Drosophila mojavensis FBgn0133835 I 0.714
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.714
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.714
GJ18313 Drosophila virilis FBgn0205472 I 0.714
LCUP008083 Lucilia cuprina LCUP008083 I 0.714
GK23867 Drosophila willistoni FBgn0225829 I 0.714
MDOA003644 Musca domestica MDOA003644 I 0.707
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.707
NV17454 Nasonia vitripennis NV17454 I 0.707
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.707
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.700
AALB008012 Anopheles albimanus AALB008012 I 0.700
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.686
AEPI007161 Anopheles epiroticus AEPI007161 I 0.686
ACOM031032 Anopheles coluzzii ACOM031032 I 0.686
AATE020589 Anopheles atroparvus AATE020589 I 0.686
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.686
AGAP007782 Anopheles gambiae AGAP007782 I 0.686
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.686
AMEM008520 Anopheles merus AMEM008520 I 0.686
AARA011979 Anopheles arabiensis AARA011979 I 0.686
AFAF000663 Anopheles farauti AFAF000663 I 0.679
ASIS021139 Anopheles sinensis ASIS021139 I 0.679
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.679
ADIR000710 Anopheles dirus ADIR000710 I 0.679
AMIN006367 Anopheles minimus AMIN006367 I 0.671
CapteG133139 Capitella teleta CapteG133139 I 0.671
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.671
ACUA018162 Anopheles culicifacies ACUA018162 I 0.671
AFUN009836 Anopheles funestus AFUN009836 I 0.671
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.671
ACHR004082 Anopheles christyi ACHR004082 I 0.671
ISCW022914 Ixodes scapularis ISCW022914 I 0.664
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.659
LotgiG112320 Lottia gigantea LotgiG112320 I 0.657
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.657
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.652
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.652
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.650
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.650
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.650
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.650
gcm2 Danio rerio ENSDARG00000045413 I 0.650
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.650
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.650
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.650
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.650
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.650
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.650
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.650
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.650
Sjc_0090760 Schistosoma japonicum Sjc_0090760 I 0.648
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.645
GCM2 Echinops telfairi ENSETEG00000012473 I 0.644
GCM2 Canis familiaris ENSCAFG00000009747 I 0.643
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.643
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.643
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.643
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.643
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.643
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.643
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.643
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.643
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.643
GCM2 Bos taurus ENSBTAG00000018787 I 0.643
GCM2 Homo sapiens ENSG00000124827 D 0.643
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.643
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.643
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.643
Aan_R001550 Calypte anna Aan_R001550 I 0.643
GCM2 Equus caballus ENSECAG00000017632 I 0.643
GCM2 Felis catus ENSFCAG00000001608 I 0.643
GCM2 Gallus gallus ENSGALG00000012768 I 0.643
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.643
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.643
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.638
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.638
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.638
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.636
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.636
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.636
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.636
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.636
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.636
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.636
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.636
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.636
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.636
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.636
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.630
GCM2 Procavia capensis ENSPCAG00000011887 I 0.629
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.629
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.629
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.629
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.629
Gcm2 Mus musculus ENSMUSG00000021362 I 0.629
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.623
SMTD_0000548601 Schistosoma mattheei SMTD_0000548601 I 0.621
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.621
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.621
SMRZ_0001689701 Schistosoma margrebowiei SMRZ_0001689701 I 0.621
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.621
Smp_171130 Schistosoma mansoni Smp_171130 I 0.621
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.614
gcm2.S Xenopus laevis XB-GENE-866131 I 0.614
gcm2 Oryzias latipes ENSORLG00000019715 I 0.614