HelroG145480 (Helobdella robusta)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 HelroG145480 T198110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.638 0.638
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.638 0.638
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.638 0.638
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.638 0.638
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.638 0.638
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.638 0.638
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.638 0.638
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.629 0.629
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.621 0.621
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.621 0.621
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.621 0.621
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.621 0.621
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.621 0.621
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.612 0.612
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP145480 GCM 1 117

Links

Other GCM family TFs
Other Helobdella robusta TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF21907 Drosophila ananassae FBgn0098907 I 0.647
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.647
CapteG133139 Capitella teleta CapteG133139 I 0.647
GL18919 Drosophila persimilis FBgn0156520 I 0.647
GM12386 Drosophila sechellia FBgn0167323 I 0.638
GCM2 Procavia capensis ENSPCAG00000011887 I 0.638
GF22779 Drosophila ananassae FBgn0099773 I 0.638
GE10457 Drosophila yakuba FBgn0228318 I 0.638
gcm2 Drosophila melanogaster FBgn0019809 D 0.638
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.638
MDOA004732 Musca domestica MDOA004732 I 0.638
GG10041 Drosophila erecta FBgn0102353 I 0.638
gcm Drosophila melanogaster FBgn0014179 D 0.638
GJ17916 Drosophila virilis FBgn0205084 I 0.629
GI17574 Drosophila mojavensis FBgn0140318 I 0.629
GK23867 Drosophila willistoni FBgn0225829 I 0.629
MCINX011946 Melitaea cinxia MCINX011946 I 0.629
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.629
AFAF005680 Anopheles farauti AFAF005680 I 0.629
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.629
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.629
MDOA003644 Musca domestica MDOA003644 I 0.629
LCUP008083 Lucilia cuprina LCUP008083 I 0.629
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.629
ADIR000711 Anopheles dirus ADIR000711 I 0.629
AMIN006368 Anopheles minimus AMIN006368 I 0.629
GCM2 Bos taurus ENSBTAG00000018787 I 0.629
GJ18313 Drosophila virilis FBgn0205472 I 0.621
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.621
AFUN009837 Anopheles funestus AFUN009837 I 0.621
AARA011980 Anopheles arabiensis AARA011980 I 0.621
AMAM003661 Anopheles maculatus AMAM003661 I 0.621
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.621
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.621
ASIS002985 Anopheles sinensis ASIS002985 I 0.621
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.621
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.621
Aan_R001550 Calypte anna Aan_R001550 I 0.621
LotgiG112320 Lottia gigantea LotgiG112320 I 0.621
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.621
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.621
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.621
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.621
HMEL005671 Heliconius melpomene HMEL005671 I 0.621
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.621
GCM2 Canis familiaris ENSCAFG00000009747 I 0.621
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.621
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.621
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.621
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.621
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.621
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.621
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.621
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.621
GCM2 Equus caballus ENSECAG00000017632 I 0.621
GCM2 Felis catus ENSFCAG00000001608 I 0.621
GCM2 Homo sapiens ENSG00000124827 D 0.621
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.621
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.621
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.621
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.621
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.621
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.621
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.621
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.621
gcm2 Oryzias latipes ENSORLG00000019715 I 0.621
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.621
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.621
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.621
AGAP007783 Anopheles gambiae AGAP007783 I 0.621
T265_00115 Opisthorchis viverrini T265_00115 I 0.612
gcm2 Danio rerio ENSDARG00000045413 I 0.612
csin108204 Clonorchis sinensis csin108204 I 0.612
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.612
AALB008013 Anopheles albimanus AALB008013 I 0.612
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.612
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.612
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.612
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.612
GK23810 Drosophila willistoni FBgn0225772 I 0.612
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.612
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.612
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.612
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.612
L798_07938 Zootermopsis nevadensis L798_07938 I 0.612
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.612
GCM2 Gallus gallus ENSGALG00000012768 I 0.612
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.612
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.612
AAEL000623 Aedes aegypti AAEL000623 I 0.612
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.612
gcm2.S Xenopus laevis XB-GENE-866131 I 0.612