LotgiG112320 (Lottia gigantea)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 LotgiG112320 T198119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.650 0.650
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.650 0.650
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.650 0.650
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.650 0.650
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.636 0.636
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.636 0.636
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.636 0.636
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.621 0.621
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.621 0.621
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.621 0.621
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.621 0.621
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP112320 GCM 4 143

Links

Other GCM family TFs
Other Lottia gigantea TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.771
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.750
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.729
PHUM436840 Pediculus humanus PHUM436840 I 0.721
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.707
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.700
ACHR001414 Anopheles christyi ACHR001414 I 0.693
L798_07938 Zootermopsis nevadensis L798_07938 I 0.693
AMIN006368 Anopheles minimus AMIN006368 I 0.686
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.686
AEPI007160 Anopheles epiroticus AEPI007160 I 0.686
GB45031 Apis mellifera GB45031 I 0.686
AMAM003661 Anopheles maculatus AMAM003661 I 0.686
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.686
AFUN009837 Anopheles funestus AFUN009837 I 0.686
ACEP23384 Atta cephalotes ACEP23384 I 0.686
AGAP007783 Anopheles gambiae AGAP007783 I 0.686
ACUA009622 Anopheles culicifacies ACUA009622 I 0.686
TC014730 Tribolium castaneum TC014730 I 0.686
AALB008013 Anopheles albimanus AALB008013 I 0.686
AARA011980 Anopheles arabiensis AARA011980 I 0.679
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.679
ADIR000711 Anopheles dirus ADIR000711 I 0.679
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.679
AFAF005680 Anopheles farauti AFAF005680 I 0.679
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.679
ADAC002327 Anopheles darlingi ADAC002327 I 0.679
ISCW022914 Ixodes scapularis ISCW022914 I 0.679
MDOA004732 Musca domestica MDOA004732 I 0.679
SINV21711 Solenopsis invicta SINV21711 I 0.679
AMEM005966 Anopheles merus AMEM005966 I 0.678
ACOM031025 Anopheles coluzzii ACOM031025 I 0.678
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.671
AMEC020313 Anopheles melas AMEC020313 I 0.671
AAEL000623 Aedes aegypti AAEL000623 I 0.671
RPRC001299 Rhodnius prolixus RPRC001299 I 0.664
CLEC013329 Cimex lectularius CLEC013329 I 0.664
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.664
ASIS002985 Anopheles sinensis ASIS002985 I 0.664
CapteG133139 Capitella teleta CapteG133139 I 0.664
KGM_05743 Danaus plexippus KGM_05743 I 0.657
MCINX011946 Melitaea cinxia MCINX011946 I 0.657
HMEL005671 Heliconius melpomene HMEL005671 I 0.657
GH11056 Drosophila grimshawi FBgn0118537 I 0.657
GI17574 Drosophila mojavensis FBgn0140318 I 0.657
GJ17916 Drosophila virilis FBgn0205084 I 0.657
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.657
NV17454 Nasonia vitripennis NV17454 I 0.657
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.657
AATE008476 Anopheles atroparvus AATE008476 I 0.657
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.657
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.657
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.654
GM12386 Drosophila sechellia FBgn0167323 I 0.650
GL19218 Drosophila persimilis FBgn0156817 I 0.650
GE10457 Drosophila yakuba FBgn0228318 I 0.650
gcm Drosophila melanogaster FBgn0014179 D 0.650
GG24019 Drosophila erecta FBgn0116158 I 0.650
MDOA003644 Musca domestica MDOA003644 I 0.650
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.650
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.645
GI11073 Drosophila mojavensis FBgn0133835 I 0.643
GF21907 Drosophila ananassae FBgn0098907 I 0.643
GH10675 Drosophila grimshawi FBgn0118156 I 0.643
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.643
LCUP008083 Lucilia cuprina LCUP008083 I 0.643
AMAM005757 Anopheles maculatus AMAM005757 I 0.642
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.638
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.638
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.638
GJ18313 Drosophila virilis FBgn0205472 I 0.636
GE18856 Drosophila yakuba FBgn0236239 I 0.636
GM17569 Drosophila sechellia FBgn0172477 I 0.636
GG10041 Drosophila erecta FBgn0102353 I 0.636
GCM2 Bos taurus ENSBTAG00000018787 I 0.636
gcm2 Drosophila melanogaster FBgn0019809 D 0.636
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.636
GF22779 Drosophila ananassae FBgn0099773 I 0.636
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.630
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.630
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.630
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.630
GCM2 Homo sapiens ENSG00000124827 D 0.630
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.630
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.630
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.630
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.629
AALB008012 Anopheles albimanus AALB008012 I 0.629
GL18919 Drosophila persimilis FBgn0156520 I 0.629
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.629
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.629
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.629
GK23810 Drosophila willistoni FBgn0225772 I 0.629
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.629
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.629
GCM1 Erinaceus europaeus ENSEEUG00000013606 I 0.627
gcm2.S Xenopus laevis XB-GENE-866131 I 0.623
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.623
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.623
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.623
AATE020589 Anopheles atroparvus AATE020589 I 0.621
GCM2 Procavia capensis ENSPCAG00000011887 I 0.621
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.621
GD22349 Drosophila simulans FBgn0193756 I 0.621
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.621
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.621
HelroG145480 Helobdella robusta HelroG145480 I 0.621
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.621
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.621
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.616
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.616
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.616
Gcm2 Mus musculus ENSMUSG00000021362 I 0.616
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.616
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.616
GCM2 Felis catus ENSFCAG00000001608 I 0.614
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.614
GCM2 Canis familiaris ENSCAFG00000009747 I 0.614
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.614
ASIS021139 Anopheles sinensis ASIS021139 I 0.614
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.614
GCM2 Equus caballus ENSECAG00000017632 I 0.614
GK23867 Drosophila willistoni FBgn0225829 I 0.614
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.614
AAEL000631 Aedes aegypti AAEL000631 I 0.614
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.614
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.614
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.614
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.614
Aan_R001550 Calypte anna Aan_R001550 I 0.614
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.614
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.614
GCM2 Echinops telfairi ENSETEG00000012473 I 0.610
GCM1 Gallus gallus ENSGALG00000016316 I 0.609
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.609
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.609
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.609
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.609
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.609
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.609
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.609
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.609
Gcm1 Mus musculus ENSMUSG00000023333 D 0.609