tetur09g06060 (Tetranychus urticae)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 tetur09g06060 T198149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.700 0.700
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.700 0.700
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.700 0.700
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.693 0.693
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.693 0.693
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.693 0.693
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.693 0.693
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.664 0.664
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.664 0.664
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.664 0.664
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.664 0.664
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.664 0.664
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.657 0.657
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.650 0.650
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.636 0.636
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.636 0.636
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.621 0.621
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.614 0.614
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.614 0.614
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.614 0.614
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.614 0.614
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.614 0.614
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.614 0.614
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.614 0.614
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.614 0.614
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.614 0.614
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.614 0.614
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
tetur09g06060.1 GCM 23 162

Links

Other GCM family TFs
Other Tetranychus urticae TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ISCW022914 Ixodes scapularis ISCW022914 I 0.821
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.814
TC014730 Tribolium castaneum TC014730 I 0.814
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.807
KGM_05743 Danaus plexippus KGM_05743 I 0.800
HMEL005671 Heliconius melpomene HMEL005671 I 0.800
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.793
MCINX011946 Melitaea cinxia MCINX011946 I 0.793
AEPI007160 Anopheles epiroticus AEPI007160 I 0.786
PHUM436840 Pediculus humanus PHUM436840 I 0.786
L798_07938 Zootermopsis nevadensis L798_07938 I 0.779
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.779
ACEP23384 Atta cephalotes ACEP23384 I 0.779
AMAM003661 Anopheles maculatus AMAM003661 I 0.779
AMIN006368 Anopheles minimus AMIN006368 I 0.779
NV17454 Nasonia vitripennis NV17454 I 0.771
AFUN009837 Anopheles funestus AFUN009837 I 0.771
ACHR001414 Anopheles christyi ACHR001414 I 0.771
ACUA009622 Anopheles culicifacies ACUA009622 I 0.771
CLEC013329 Cimex lectularius CLEC013329 I 0.771
RPRC001299 Rhodnius prolixus RPRC001299 I 0.771
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.771
AGAP007783 Anopheles gambiae AGAP007783 I 0.771
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.771
GB45031 Apis mellifera GB45031 I 0.771
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.764
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.764
ADIR000711 Anopheles dirus ADIR000711 I 0.764
ASIS002985 Anopheles sinensis ASIS002985 I 0.764
AATE008476 Anopheles atroparvus AATE008476 I 0.764
AARA011980 Anopheles arabiensis AARA011980 I 0.764
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.764
AMEC020313 Anopheles melas AMEC020313 I 0.757
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.757
AFAF005680 Anopheles farauti AFAF005680 I 0.757
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.757
ADAC002327 Anopheles darlingi ADAC002327 I 0.757
AAEL000623 Aedes aegypti AAEL000623 I 0.757
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.757
AALB008013 Anopheles albimanus AALB008013 I 0.757
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.757
SINV21711 Solenopsis invicta SINV21711 I 0.757
AMAM005757 Anopheles maculatus AMAM005757 I 0.752
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.743
AALB008012 Anopheles albimanus AALB008012 I 0.736
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.729
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.729
ASIS021139 Anopheles sinensis ASIS021139 I 0.729
MDOA004732 Musca domestica MDOA004732 I 0.721
AATE020589 Anopheles atroparvus AATE020589 I 0.721
LCUP008083 Lucilia cuprina LCUP008083 I 0.714
MDOA003644 Musca domestica MDOA003644 I 0.714
AAEL000631 Aedes aegypti AAEL000631 I 0.714
ADIR000710 Anopheles dirus ADIR000710 I 0.714
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.707
GF21907 Drosophila ananassae FBgn0098907 I 0.707
GJ18313 Drosophila virilis FBgn0205472 I 0.707
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.707
GL18919 Drosophila persimilis FBgn0156520 I 0.707
GI11073 Drosophila mojavensis FBgn0133835 I 0.707
AARA011979 Anopheles arabiensis AARA011979 I 0.707
CapteG133139 Capitella teleta CapteG133139 I 0.707
AQUA003641 Anopheles quadriannulatus AQUA003641 I 0.707
AEPI007161 Anopheles epiroticus AEPI007161 I 0.707
AMEM008520 Anopheles merus AMEM008520 I 0.707
AFAF000663 Anopheles farauti AFAF000663 I 0.707
AGAP007782 Anopheles gambiae AGAP007782 I 0.707
ASTEI01673 Anopheles stephensi ASTEI01673 I 0.707
ACOM031032 Anopheles coluzzii ACOM031032 I 0.707
GF22779 Drosophila ananassae FBgn0099773 I 0.700
GM17569 Drosophila sechellia FBgn0172477 I 0.700
gcm2 Drosophila melanogaster FBgn0019809 D 0.700
AMIN006367 Anopheles minimus AMIN006367 I 0.700
GH10675 Drosophila grimshawi FBgn0118156 I 0.700
GG10041 Drosophila erecta FBgn0102353 I 0.700
AFUN009836 Anopheles funestus AFUN009836 I 0.700
GE18856 Drosophila yakuba FBgn0236239 I 0.700
ACHR004082 Anopheles christyi ACHR004082 I 0.700
ACUA018162 Anopheles culicifacies ACUA018162 I 0.700
GL19218 Drosophila persimilis FBgn0156817 I 0.693
gcm Drosophila melanogaster FBgn0014179 D 0.693
GM12386 Drosophila sechellia FBgn0167323 I 0.693
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.693
GG24019 Drosophila erecta FBgn0116158 I 0.686
GE10457 Drosophila yakuba FBgn0228318 I 0.686
GI17574 Drosophila mojavensis FBgn0140318 I 0.686
GJ17916 Drosophila virilis FBgn0205084 I 0.686
BGLB002570 Biomphalaria glabrata BGLB002570 I 0.686
GK23810 Drosophila willistoni FBgn0225772 I 0.686
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.686
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.682
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.681
LotgiG112320 Lottia gigantea LotgiG112320 I 0.679
GH11056 Drosophila grimshawi FBgn0118537 I 0.679
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.679
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.679
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.674
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.674
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.671
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.671
GCM2 Canis familiaris ENSCAFG00000009747 I 0.671
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.671
GCM2 Equus caballus ENSECAG00000017632 I 0.671
GCM2 Procavia capensis ENSPCAG00000011887 I 0.671
gcm2 Oryzias latipes ENSORLG00000019715 I 0.671
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.671
GK23867 Drosophila willistoni FBgn0225829 I 0.671
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.671
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.671
gcm2.S Xenopus laevis XB-GENE-866131 I 0.671
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.671
GCM2 Felis catus ENSFCAG00000001608 I 0.671
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.671
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.667
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.664
GD22349 Drosophila simulans FBgn0193756 I 0.664
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.664
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.664
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.664
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.664
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.664
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.664
GCM2 Bos taurus ENSBTAG00000018787 I 0.664
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.664
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.664
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.664
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.664
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.664
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.664
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.664
GCM2 Homo sapiens ENSG00000124827 D 0.664
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.664
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.657
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.657
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.657
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.657
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.657
gcm2 Danio rerio ENSDARG00000045413 I 0.657
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.657
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.657
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.657
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.657
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.657
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.652
ENSPSIG00000013518 Pelodiscus sinensis ENSPSIG00000013518 I 0.652
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.650
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.650
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.650
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.650
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.650
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.650
Gcm2 Mus musculus ENSMUSG00000021362 I 0.650
GCM2 Gallus gallus ENSGALG00000012768 I 0.650
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.650
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.650
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.650
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.650
Aan_R001550 Calypte anna Aan_R001550 I 0.650
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.650
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.645
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.645
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.643
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.643
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.643
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.643
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.643
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.638
Gcm1 Mus musculus ENSMUSG00000023333 D 0.636
Tal_R009935 Tyto alba Tal_R009935 I 0.636
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.630
GCM1 Equus caballus ENSECAG00000014228 I 0.630
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.630
ENSSHAG00000015905 Sarcophilus harrisii ENSSHAG00000015905 I 0.629
ENSCPOG00000006856 Cavia porcellus ENSCPOG00000006856 I 0.629
Myotis_brandtii_Gcm1_10005135 Myotis brandtii Myotis_brandtii_Gcm1_10005135 I 0.629
GCM1 Monodelphis domestica ENSMODG00000018803 I 0.629
GCM1 Myotis lucifugus ENSMLUG00000002762 I 0.629
GCM1 Bos taurus ENSBTAG00000008148 I 0.623
ENSTSYG00000000507 Tarsius syrichta ENSTSYG00000000507 I 0.623
ENSBTAP00000010709-D1 Bos grunniens ENSBTAP00000010709-D1 I 0.623
ENSOARG00000015312 Ovis aries ENSOARG00000015312 I 0.623
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.621
GCM1 Pteropus vampyrus ENSPVAG00000013341 I 0.621
Brh_R000788 Buceros rhinoceros Brh_R000788 I 0.621
Aan_R001196 Calypte anna Aan_R001196 I 0.621
ENSTGUG00000012867 Taeniopygia guttata ENSTGUG00000012867 I 0.621
GCM1 Canis familiaris ENSCAFG00000002273 I 0.621
GCM1 Gallus gallus ENSGALG00000016316 I 0.621
GCM1 Felis catus ENSFCAG00000009490 I 0.621
GCM1 Meleagris gallopavo ENSMGAG00000013927 D 0.621
ENSMPUG00000008870 Mustela putorius furo ENSMPUG00000008870 I 0.621
Gfo_R013721 Geospiza fortis Gfo_R013721 I 0.621
ENSLACG00000003372 Latimeria chalumnae ENSLACG00000003372 I 0.616
GCM1 Pan troglodytes ENSPTRG00000018288 I 0.614
ENSP00000259803 Macaca fascicularis ENSP00000259803 I 0.614
ENSAMEG00000005755 Ailuropoda melanoleuca ENSAMEG00000005755 I 0.614
GCM1 Callithrix jacchus ENSCJAG00000011189 I 0.614
XP_004449939.1 Dasypus novemcinctus XP_004449939.1 D 0.614
ENSCSAG00000013148 Chlorocebus sabaeus ENSCSAG00000013148 I 0.614
ENSPPYG00000016719 Pongo abelii ENSPPYG00000016719 I 0.614
GCM1 Tursiops truncatus ENSTTRG00000015250 I 0.614
GCM1 Loxodonta africana ENSLAFG00000012093 I 0.614
GCM1 Otolemur garnettii ENSOGAG00000007879 I 0.614
GCM1 Gorilla gorilla ENSGGOG00000006527 I 0.614
GCM1 Homo sapiens ENSG00000137270 D 0.614
GCM1 Macaca mulatta ENSMMUG00000022083 I 0.614
ENSNLEG00000003544 Nomascus leucogenys ENSNLEG00000003544 I 0.614
ENSLOCG00000016883 Lepisosteus oculatus ENSLOCG00000016883 I 0.614
GCM1 Dasypus novemcinctus ENSDNOG00000016682 I 0.614
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.609