ASTEI01672 (Anopheles stephensi)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 ASTEI01672 T198228_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gcm2
M02026_2.00
Drosophila melanogaster
ATGCGGGY

RCCCGCAT
PBM
Weirauch et al.(2014)
pTH8361
0.779 0.779
gcm2
M03767_2.00
Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN

NATGCGGGYNNNRCCCGCATN
SELEX
Nitta et al.(2015)
gcm2_1
0.779 0.779
gcm2
M03768_2.00
Drosophila melanogaster
BATGCKGGTACCMGCATV

BATGCKGGTACCMGCATV
SELEX
Nitta et al.(2015)
gcm2_2
0.779 0.779
gcm
M03764_2.00
Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV

BATGCGGGYVBBRCCCGCATD
SELEX
Nitta et al.(2015)
gcm_1
0.757 0.757
gcm
M03765_2.00
Drosophila melanogaster
VATGCKGGYRCCMGCATV

BATGCKGGYRCCMGCATB
SELEX
Nitta et al.(2015)
gcm_2
0.757 0.757
gcm
M03766_2.00
Drosophila melanogaster
YATGCGGGTACCAGCATV

BATGCTGGTACCCGCATR
SELEX
Nitta et al.(2015)
gcm_3
0.757 0.757
gcm
M10605_2.00
Drosophila melanogaster
NDNATGCGGGYNB

VNRCCCGCATNHN
Transfac
Matys et al.(2006)
I$GCM_01
0.757 0.757
ENSTRUG00000003586
M02025_2.00
Takifugu rubripes
NRTRNGGGYN

NRCCCNYAYN
PBM
Weirauch et al.(2014)
pTH9357
0.679 0.679
gcm2
M02024_2.00
Tetraodon nigroviridis
ATRCGGGY

RCCCGYAT
PBM
Weirauch et al.(2014)
pTH9386
0.671 0.671
GCM2
M03067_2.00
Homo sapiens
NATGCGGGYD

HRCCCGCATN
SELEX
Jolma et al.(2013)
GCM2_1
0.671 0.671
GCM2
M04881_2.00
Homo sapiens
RTGCGGGYN

NRCCCGCAY
SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX
0.671 0.671
GCM2
M10602_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCMB_Q2
0.671 0.671
GCM2
M04882_2.00
Homo sapiens
ATRHKGGYN

NRCCMDYAT
SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX
0.671 0.671
GCM2
M02023_2.00
Taeniopygia guttata
NRTRHKGGYN

NRCCMDYAYN
PBM
Weirauch et al.(2014)
pTH9341
0.664 0.664
GCM1
M02021_2.00
Meleagris gallopavo
VTVNKGGYNN

NNRCCMNBAB
PBM
Weirauch et al.(2014)
pTH8653
0.621 0.621
Gcm1
M00168_2.00
Mus musculus
NVTRVGGGY

RCCCBYABN
PBM
Badis et al.(2009)
Gcm1_3732
0.621 0.621
Gcm1
M02022_2.00
Rattus norvegicus
NNRTRVGGGY

RCCCBYAYNN
PBM
Weirauch et al.(2014)
pTH9283
0.621 0.621
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASTEI01672-PA GCM 37 177

Links

Other GCM family TFs
Other Anopheles stephensi TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N 0.000
Traes_7DL_70D4FDB2A Triticum aestivum Traes_7DL_70D4FDB2A N 0.000
Traes_7BL_096916DC5 Triticum aestivum Traes_7BL_096916DC5 N 0.000
Traes_7AL_C7CF7087B Triticum aestivum Traes_7AL_C7CF7087B N 0.000
Traes_7AL_A8CAE984E Triticum aestivum Traes_7AL_A8CAE984E N 0.000
Traes_5DS_4F7973584 Triticum aestivum Traes_5DS_4F7973584 N 0.000
Traes_5BS_FC54F9BEA Triticum aestivum Traes_5BS_FC54F9BEA N 0.000
Traes_5AS_6F02C9967 Triticum aestivum Traes_5AS_6F02C9967 N 0.000
Traes_1AL_00A8A2030 Triticum aestivum Traes_1AL_00A8A2030 N 0.000
TCM_042360 Theobroma cacao TCM_042360 N 0.000
Si037105m.g Setaria italica Si037105m.g N 0.000
Si007107m.g Setaria italica Si007107m.g N 0.000
SELMODRAFT_414462 Selaginella moellendorffii SELMODRAFT_414462 N 0.000
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N 0.000
Sb10g030250 Sorghum bicolor Sb10g030250 N 0.000
Sb09g024290 Sorghum bicolor Sb09g024290 N 0.000
PRUPE_ppa019868mg Prunus persica PRUPE_ppa019868mg N 0.000
POPTR_0003s20320 Populus trichocarpa POPTR_0003s20320 N 0.000
Traes_7DL_7DDA16622 Triticum aestivum Traes_7DL_7DDA16622 N 0.000
TRIUR3_01653 Triticum urartu TRIUR3_01653 N 0.000
TRIUR3_12850 Triticum urartu TRIUR3_12850 N 0.000
SapurV1A.0445s0220 Salix purpurea SapurV1A.0445s0220 N 0.000
SapurV1A.0009s0600 Salix purpurea SapurV1A.0009s0600 N 0.000
Pavir.J25286 Panicum virgatum Pavir.J25286 N 0.000
Pavir.J21984 Panicum virgatum Pavir.J21984 N 0.000
Pavir.J05283 Panicum virgatum Pavir.J05283 N 0.000
Pavir.J00911 Panicum virgatum Pavir.J00911 N 0.000
Pavir.Db00007 Panicum virgatum Pavir.Db00007 N 0.000
MDP0000898701 Malus domestica MDP0000898701 N 0.000
MDP0000893802 Malus domestica MDP0000893802 N 0.000
MDP0000190186 Malus domestica MDP0000190186 N 0.000
Lus10016368.g Linum usitatissimum Lus10016368.g N 0.000
Aquca_075_00033 Aquilegia coerulea Aquca_075_00033 N 0.000
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N 0.000
Pm016548 Prunus mume Pm016548 N 0.000
ATBZIP24 Vitis vinifera VIT_13s0158g00380 N 0.000
TRIUR3_23486 Triticum urartu TRIUR3_23486 N 0.000
TRIUR3_17772 Triticum urartu TRIUR3_17772 N 0.000
POPTR_0001s05750 Populus trichocarpa POPTR_0001s05750 N 0.000
OS11G0139500 Oryza sativa OS11G0139500 N 0.000
OS06G0716800 Oryza sativa OS06G0716800 N 0.000
LPERR12G02240 Leersia perrieri LPERR12G02240 N 0.000
LPERR11G02130 Leersia perrieri LPERR11G02130 N 0.000
LPERR06G23100 Leersia perrieri LPERR06G23100 N 0.000
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N 0.000
GSMUA_Achr4G00320_001 Musa acuminata GSMUA_Achr4G00320_001 N 0.000
GRMZM2G175870 Zea mays GRMZM2G175870 N 0.000
GRMZM2G055413 Zea mays GRMZM2G055413 N 0.000
GRMZM2G000171 Zea mays GRMZM2G000171 N 0.000
GLYMA11G16050 Glycine max GLYMA11G16050 N 0.000
F775_29696 Aegilops tauschii F775_29696 N 0.000
F775_17324 Aegilops tauschii F775_17324 N 0.000
F775_17323 Aegilops tauschii F775_17323 N 0.000
F775_08202 Aegilops tauschii F775_08202 N 0.000
F775_07298 Aegilops tauschii F775_07298 N 0.000
BRADI1G30140 Brachypodium distachyon BRADI1G30140 N 0.000
Bo9g024230 Brassica oleracea Bo9g024230 N 0.000
BGIOSGA036957 Oryza indica BGIOSGA036957 N 0.000
MLOC_13410 Hordeum vulgare MLOC_13410 N 0.000
MLOC_60894 Hordeum vulgare MLOC_60894 N 0.000
OB0044G10110 Oryza brachyantha OB0044G10110 N 0.000
ORUFI12G02510 Oryza rufipogon ORUFI12G02510 N 0.000
ORUFI06G29500 Oryza rufipogon ORUFI06G29500 N 0.000
ORGLA06G0232500 Oryza glaberrima ORGLA06G0232500 N 0.000
OPUNC12G02170 Oryza punctata OPUNC12G02170 N 0.000
OPUNC06G25210 Oryza punctata OPUNC06G25210 N 0.000
ONIVA11G02620 Oryza nivara ONIVA11G02620 N 0.000
ONIVA06G30110 Oryza nivara ONIVA06G30110 N 0.000
OMERI12G01070 Oryza meridionalis OMERI12G01070 N 0.000
OMERI06G27590 Oryza meridionalis OMERI06G27590 N 0.000
OLONG_023558 Oryza longistaminata OLONG_023558 N 0.000
OGLUM06G28970 Oryza glumaepatula OGLUM06G28970 N 0.000
OBART12G02110 Oryza barthii OBART12G02110 N 0.000
OBART11G02390 Oryza barthii OBART11G02390 N 0.000
OBART06G27540 Oryza barthii OBART06G27540 N 0.000
OB12G12480 Oryza brachyantha OB12G12480 N 0.000
OB06G35370 Oryza brachyantha OB06G35370 N 0.000
OB05G28920 Oryza brachyantha OB05G28920 N 0.000
BGIOSGA034759 Oryza indica BGIOSGA034759 N 0.000