BGLB002570 (Biomphalaria glabrata)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 BGLB002570 T198230_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.657 0.657
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.657 0.657
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.657 0.657
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.657 0.657
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.621 0.621
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.621 0.621
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.621 0.621
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB002570-PA GCM 7 146

Links

Other GCM family TFs
Other Biomphalaria glabrata TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22027544m.g Octopus bimaculoides Ocbimv22027544m.g I 0.750
LotgiG112320 Lottia gigantea LotgiG112320 I 0.729
LDEC012509 Leptinotarsa decemlineata LDEC012509 I 0.707
YQE_03062 Dendroctonus ponderosae YQE_03062 I 0.707
GB45031 Apis mellifera GB45031 I 0.707
Hsal_09608--XP_393815.2_APIME Harpegnathos saltator Hsal_09608--XP_393815.2_APIME I 0.700
TC014730 Tribolium castaneum TC014730 I 0.700
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.700
Cflo_04549--XP_393815.2_APIME Camponotus floridanus Cflo_04549--XP_393815.2_APIME I 0.700
ACEP23384 Atta cephalotes ACEP23384 I 0.700
L798_07938 Zootermopsis nevadensis L798_07938 I 0.700
SINV21711 Solenopsis invicta SINV21711 I 0.693
tetur09g06060 Tetranychus urticae tetur09g06060 I 0.686
CapteG133139 Capitella teleta CapteG133139 I 0.686
PPAI003635 Phlebotomus papatasi PPAI003635 I 0.686
HMEL005671 Heliconius melpomene HMEL005671 I 0.679
KGM_05743 Danaus plexippus KGM_05743 I 0.679
MCINX011946 Melitaea cinxia MCINX011946 I 0.679
PHUM436840 Pediculus humanus PHUM436840 I 0.679
AATE008476 Anopheles atroparvus AATE008476 I 0.679
AFUN009837 Anopheles funestus AFUN009837 I 0.679
AMAM003661 Anopheles maculatus AMAM003661 I 0.679
AMIN006368 Anopheles minimus AMIN006368 I 0.679
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.679
AFAF005680 Anopheles farauti AFAF005680 I 0.679
BGIBMGA006182 Bombyx mori BGIBMGA006182 I 0.679
ACHR001414 Anopheles christyi ACHR001414 I 0.679
AEPI007160 Anopheles epiroticus AEPI007160 I 0.679
ADIR000711 Anopheles dirus ADIR000711 I 0.679
NV17454 Nasonia vitripennis NV17454 I 0.671
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.671
ACUA009622 Anopheles culicifacies ACUA009622 I 0.671
CLEC013329 Cimex lectularius CLEC013329 I 0.671
ISCW022914 Ixodes scapularis ISCW022914 I 0.671
DAPPUDRAFT_26189 Daphnia pulex DAPPUDRAFT_26189 I 0.671
AGAP007783 Anopheles gambiae AGAP007783 I 0.671
RPRC001299 Rhodnius prolixus RPRC001299 I 0.664
GK23810 Drosophila willistoni FBgn0225772 I 0.664
GF21907 Drosophila ananassae FBgn0098907 I 0.664
ASIS002985 Anopheles sinensis ASIS002985 I 0.664
AARA011980 Anopheles arabiensis AARA011980 I 0.664
GG24019 Drosophila erecta FBgn0116158 I 0.657
GL19218 Drosophila persimilis FBgn0156817 I 0.657
CpipJ_CPIJ006640 Culex pipiens CpipJ_CPIJ006640 I 0.657
fgenesh2_pg.scaffold_122000051 Branchiostoma floridae fgenesh2_pg.scaffold_122000051 I 0.657
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.657
gcm Drosophila melanogaster FBgn0014179 D 0.657
GE10457 Drosophila yakuba FBgn0228318 I 0.657
ACYPI34548 Acyrthosiphon pisum ACYPI34548 I 0.657
CPIJ006640 Culex quinquefasciatus CPIJ006640 I 0.657
GM12386 Drosophila sechellia FBgn0167323 I 0.657
AMEC020313 Anopheles melas AMEC020313 I 0.657
GCM1 Oryctolagus cuniculus ENSOCUG00000009246 I 0.654
ADAC002327 Anopheles darlingi ADAC002327 I 0.650
AALB008013 Anopheles albimanus AALB008013 I 0.650
AAEL000623 Aedes aegypti AAEL000623 I 0.650
AALB008012 Anopheles albimanus AALB008012 I 0.643
MDOA004732 Musca domestica MDOA004732 I 0.643
gcm1.S Xenopus laevis XB-GENE-6252686 I 0.638
GH11056 Drosophila grimshawi FBgn0118537 I 0.636
ENSPMAG00000009211 Petromyzon marinus ENSPMAG00000009211 I 0.636
CPIJ006639 Culex quinquefasciatus CPIJ006639 I 0.636
CpipJ_CPIJ006639 Culex pipiens CpipJ_CPIJ006639 I 0.636
MDOA003644 Musca domestica MDOA003644 I 0.636
SCUD_0000094701 Schistosoma curassoni SCUD_0000094701 N 0.633
LCUP008083 Lucilia cuprina LCUP008083 I 0.629
ASIS021139 Anopheles sinensis ASIS021139 I 0.629
Sjc_0024710 Schistosoma japonicum Sjc_0024710 N 0.629
Smp_152660 Schistosoma mansoni Smp_152660 N 0.629
GJ18313 Drosophila virilis FBgn0205472 I 0.629
GJ17916 Drosophila virilis FBgn0205084 I 0.629
GD22349 Drosophila simulans FBgn0193756 I 0.629
GI17574 Drosophila mojavensis FBgn0140318 I 0.629
GI11073 Drosophila mojavensis FBgn0133835 I 0.629
SROB_0001396601 Schistosoma rodhaini SROB_0001396601 N 0.629
GH10675 Drosophila grimshawi FBgn0118156 I 0.629
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.623
ADIR000710 Anopheles dirus ADIR000710 I 0.621
GM17569 Drosophila sechellia FBgn0172477 I 0.621
AATE020589 Anopheles atroparvus AATE020589 I 0.621
GE18856 Drosophila yakuba FBgn0236239 I 0.621
GG10041 Drosophila erecta FBgn0102353 I 0.621
gcm2 Drosophila melanogaster FBgn0019809 D 0.621
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.621
GF22779 Drosophila ananassae FBgn0099773 I 0.621
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.621
csin110955 Clonorchis sinensis csin110955 N 0.619
T265_07925 Opisthorchis viverrini T265_07925 N 0.619
Gcm1 Rattus norvegicus ENSRNOG00000007932 D 0.616
AAEL000631 Aedes aegypti AAEL000631 I 0.614
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.614
Sakowv30018670m.g Saccoglossus kowalevskii Sakowv30018670m.g I 0.614
AFAF000663 Anopheles farauti AFAF000663 I 0.614
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.614
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.614
GA17734 Drosophila pseudoobscura FBgn0077744 I 0.614
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.614
Afo_R000272 Aptenodytes forsteri Afo_R000272 I 0.614
GL18919 Drosophila persimilis FBgn0156520 I 0.614
GCM2 Bos taurus ENSBTAG00000018787 I 0.614
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.609
Pvit_03812 Pogona vitticeps Pvit_03812 I 0.609
ENSAPLG00000004160 Anas platyrhynchos ENSAPLG00000004160 I 0.609
ENSFALG00000001854 Ficedula albicollis ENSFALG00000001854 I 0.609
ENSMEUG00000004103 Macropus eugenii ENSMEUG00000004103 I 0.609
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.609