A_07498 (Schistosoma haematobium)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 A_07498 T198236_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.667 0.667
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.667 0.667
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.667 0.667
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.667 0.667
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
A_07498 GCM 1 133

Links

Other GCM family TFs
Other Schistosoma haematobium TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_171130 Schistosoma mansoni Smp_171130 I 1.000
SMRZ_0001689701 Schistosoma margrebowiei SMRZ_0001689701 I 1.000
SMTD_0000548601 Schistosoma mattheei SMTD_0000548601 I 1.000
Sjc_0090760 Schistosoma japonicum Sjc_0090760 I 0.952
T265_00115 Opisthorchis viverrini T265_00115 I 0.884
D915_04811 Fasciola hepatica D915_04811 I 0.876
csin108204 Clonorchis sinensis csin108204 I 0.851
ECPE_0000966901 Echinostoma caproni ECPE_0000966901 I 0.830
TRE_0001360101 Trichobilharzia regenti TRE_0001360101 I 0.690
MCOS_0000650801 Mesocestoides corti MCOS_0000650801 I 0.674
gcm Drosophila melanogaster FBgn0014179 D 0.667
GM12386 Drosophila sechellia FBgn0167323 I 0.667
PXEA_0000106701 Protopolystoma xenopodis PXEA_0000106701 N 0.662
GK23810 Drosophila willistoni FBgn0225772 I 0.659
GI17574 Drosophila mojavensis FBgn0140318 I 0.643
GJ17916 Drosophila virilis FBgn0205084 I 0.643
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.639
AAEL000623 Aedes aegypti AAEL000623 I 0.620
TASK_0000418001 Taenia asiatica TASK_0000418001 N 0.619
GA11505 Drosophila pseudoobscura FBgn0071556 I 0.614
GL19218 Drosophila persimilis FBgn0156817 I 0.614
GE10457 Drosophila yakuba FBgn0228318 I 0.614
GG24019 Drosophila erecta FBgn0116158 I 0.614
ADIR000711 Anopheles dirus ADIR000711 I 0.612
SINV21711 Solenopsis invicta SINV21711 I 0.612
GK23867 Drosophila willistoni FBgn0225829 I 0.612
CGI_10019940 Crassostrea gigas CGI_10019940 I 0.612
AGAP007783 Anopheles gambiae AGAP007783 I 0.612
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.612
AARA011980 Anopheles arabiensis AARA011980 I 0.612
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.612
AMIN006368 Anopheles minimus AMIN006368 I 0.612
AMAM003661 Anopheles maculatus AMAM003661 I 0.612
AFAF005680 Anopheles farauti AFAF005680 I 0.612
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.609