T265_00115 (Opisthorchis viverrini)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 T265_00115 T198275_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.619 0.619
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.619 0.619
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.619 0.619
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.619 0.619
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_00115 GCM 188 325

Links

Other GCM family TFs
Other Opisthorchis viverrini TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin108204 Clonorchis sinensis csin108204 I 0.993
D915_04811 Fasciola hepatica D915_04811 I 0.896
Smp_171130 Schistosoma mansoni Smp_171130 I 0.888
SMTD_0000548601 Schistosoma mattheei SMTD_0000548601 I 0.888
SMRZ_0001689701 Schistosoma margrebowiei SMRZ_0001689701 I 0.888
A_07498 Schistosoma haematobium A_07498 I 0.884
ECPE_0000966901 Echinostoma caproni ECPE_0000966901 I 0.867
Sjc_0090760 Schistosoma japonicum Sjc_0090760 I 0.864
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.663
PXEA_0000106701 Protopolystoma xenopodis PXEA_0000106701 N 0.646
MCOS_0000650801 Mesocestoides corti MCOS_0000650801 I 0.634
ADIR000711 Anopheles dirus ADIR000711 I 0.634
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.632
AFAF005680 Anopheles farauti AFAF005680 I 0.627
AMEM005966 Anopheles merus AMEM005966 I 0.621
ACOM031025 Anopheles coluzzii ACOM031025 I 0.621
EmuJ_000821700 Echinococcus multilocularis EmuJ_000821700 N 0.619
GM12386 Drosophila sechellia FBgn0167323 I 0.619
gcm Drosophila melanogaster FBgn0014179 D 0.619
TASK_0000418001 Taenia asiatica TASK_0000418001 N 0.619
ECANG7_01805 Echinococcus canadensis ECANG7_01805 N 0.619
GI17574 Drosophila mojavensis FBgn0140318 I 0.612
AQUA003642 Anopheles quadriannulatus AQUA003642 I 0.612
AGAP007783 Anopheles gambiae AGAP007783 I 0.612
AMIN006368 Anopheles minimus AMIN006368 I 0.612
ASTEI01672 Anopheles stephensi ASTEI01672 I 0.612
GJ17916 Drosophila virilis FBgn0205084 I 0.612
GK23867 Drosophila willistoni FBgn0225829 I 0.612
AAEL000623 Aedes aegypti AAEL000623 I 0.612
GK23810 Drosophila willistoni FBgn0225772 I 0.612
AMAM003661 Anopheles maculatus AMAM003661 I 0.612
HelroG145480 Helobdella robusta HelroG145480 I 0.612