SKUD_192107 (Saccharomyces kudriavzevii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF12550 (GCR1_C) IPR022210 SKUD_192107 T198631_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCR1
M00914_2.00 		Saccharomyces cerevisiae
RGVDDCBWVW
WBWVGHHBCY		 PBM
Gordan et al.(2011)
Gcr1 		1.000 1.000
GCR1
M08569_2.00 		Saccharomyces cerevisiae
VCTTCCH
DGGAAGB		 Misc
DeBoer et al.(2011)
YPL075W_2071 		1.000 1.000
GCR1
M10606_2.00 		Saccharomyces cerevisiae
RKCTTCCWS
SWGGAAGYY		 Transfac
Matys et al.(2006)
F$GCR1_01 		1.000 1.000
GCR1
M10607_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_B 		1.000 1.000
GCR1
M10608_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_Q4 		1.000 1.000
GCR1
M08456_2.00 		Saccharomyces cerevisiae
RKCTTCCW
WGGAAGMY		 COMPILED
Mathelier et al.(2014)
MA0304.1 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41486 GCR1 696 788

Links

Other GCR1 family TFs
Other Saccharomyces kudriavzevii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22012_YPL075W Saccharomyces mikatae 22012_YPL075W I 1.000
GCR1 Saccharomyces cerevisiae YPL075W D 1.000
22618_YPL075W Saccharomyces paradoxus 22618_YPL075W I 1.000
NDAI_0E02800 Naumovozyma dairenensis NDAI_0E02800 I 0.911
Kpol_1048p60 Vanderwaltozyma polyspora Kpol_1048p60 I 0.899
KAFR_0E00910 Kazachstania africana KAFR_0E00910 I 0.899
KNAG_0A01950 Kazachstania naganishii KNAG_0A01950 I 0.886
ZYRO0D03916g Zygosaccharomyces rouxii ZYRO0D03916g I 0.886
TDEL_0B03030 Torulaspora delbrueckii TDEL_0B03030 I 0.873
NCAS_0C02090 Naumovozyma castellii NCAS_0C02090 I 0.873
Scas_Contig664.15 Saccharomyces castellii Scas_Contig664.15 I 0.873
ZBAI_01205 Zygosaccharomyces bailii ZBAI_01205 I 0.861
ZBAI_07289 Zygosaccharomyces bailii ZBAI_07289 I 0.861
CAGL0H05379g Candida glabrata CAGL0H05379g I 0.861
TPHA_0I01890 Tetrapisispora phaffii TPHA_0I01890 I 0.835
KLTH0E12584g Kluyveromyces thermotolerans KLTH0E12584g I 0.785
SAKL0H10010g Lachancea kluyveri SAKL0H10010g I 0.785
TBLA_0B04590 Tetrapisispora blattae TBLA_0B04590 I 0.785
KLTH0E12584g Lachancea thermotolerans KLTH0E12584g I 0.785
Ecym_7037 Eremothecium cymbalariae Ecym_7037 I 0.772
Kwal_12044 Kluyveromyces waltii Kwal_12044 I 0.759
KLLA0_E23431g Kluyveromyces lactis KLLA0_E23431g I 0.759
AACERI_AaceriAEL245W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL245W I 0.759
LALA0_S04e03466g Lachancea lanzarotensis LALA0_S04e03466g I 0.747
AGOS_AEL245W Ashbya gossypii AGOS_AEL245W I 0.734