UBP1 (Homo sapiens)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSG00000153560 T199009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN

NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
(Direct) (Direct)
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH

DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
(Direct) (Direct)
UBP1
M10614_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
(Direct) (Direct)
UBP1
M10615_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA

TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.740 0.740
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH

DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.774 0.774
TFCP2L1
M10609_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.774 0.774
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH

DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.774 0.774
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.750 0.750
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.750 0.750
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB

VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.750 0.750
TFCP2
M03074_2.00
Homo sapiens
DAWCCGGTTY

RAACCGGWTH
SELEX
Jolma et al.(2013)
TFCP2_1
0.724 0.724
TFCP2
M03075_2.00
Homo sapiens
WCCGGWWHDAWCYGGW

WCCRGWTHDWWCCGGW
SELEX
Jolma et al.(2013)
TFCP2_2
0.724 0.724
TFCP2
M04889_2.00
Homo sapiens
DWCYRGWHNNDWCYRGWH

DWCYRGWHNNDWCYRGWH
SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX
0.724 0.724
TFCP2
M04891_2.00
Homo sapiens
AWCYGGTTHNDACCGGTW

WACCGGTHNDAACCRGWT
SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX
0.724 0.724
TFCP2
M10610_2.00
Homo sapiens
CTKGKTHKDGC

GCHMDAMCMAG
Transfac
Matys et al.(2006)
V$CP2_01
0.724 0.724
TFCP2
M10611_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CP2_02
0.724 0.724
TFCP2
M10612_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CP2_Q4
0.724 0.724
TFCP2
M10613_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CP2_Q6
0.724 0.724
TFCP2
M04890_2.00
Homo sapiens
DWCYRGWHNNDWCYRGWH

DWCYRGWHNNDWCYRGWH
SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX
0.724 0.724
TFCP2
M04892_2.00
Homo sapiens
AWCCGGWTNDAWCCGGTT

AACCGGWTHNAACCGGWT
SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX
0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000283628 Grainyhead 43 257
ENSP00000283629 Grainyhead 43 257
ENSP00000395558 Grainyhead 43 257
ENSP00000401614 Grainyhead 42 148

Links

Other Grainyhead family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action