grhl2a (Gasterosteus aculeatus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSGACG00000003655 T199012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.744 0.744
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.716 0.716
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.716 0.716
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000004801 Grainyhead 228 430
ENSGACP00000004808 Grainyhead 217 427

Links

Other Grainyhead family TFs
Other Gasterosteus aculeatus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I 0.841
ENSXMAG00000002574 Xiphophorus maculatus ENSXMAG00000002574 N 0.786
grhl2a Takifugu rubripes ENSTRUG00000011936 N 0.784
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.777
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N 0.762
grhl2a Oryzias latipes ENSORLG00000002613 N 0.761
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.757
ENSTGUG00000014574 Taeniopygia guttata ENSTGUG00000014574 I 0.755
Tal_R009556 Tyto alba Tal_R009556 I 0.755
grhl1 Danio rerio ENSDARG00000061391 I 0.747
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I 0.745
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I 0.743
ENSONIG00000006874 Oreochromis niloticus ENSONIG00000006874 N 0.740
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.724
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.715