ubp1 (Gasterosteus aculeatus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSGACG00000005520 T199014_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN

NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.816 0.816
UBP1
M10614_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.816 0.816
UBP1
M10615_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.816 0.816
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH

DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.816 0.816
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA

TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.758 0.758
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH

DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.725 0.725
TFCP2L1
M10609_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.725 0.725
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH

DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.725 0.725
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.705 0.705
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.705 0.705
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB

VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000007333 Grainyhead 43 258
ENSGACP00000007338 Grainyhead 43 258

Links

Other Grainyhead family TFs
Other Gasterosteus aculeatus TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.957
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.932
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.913
ENSSARG00000013877 Sorex araneus ENSSARG00000013877 I 0.884
ENSGGOG00000023919 Gorilla gorilla ENSGGOG00000023919 I 0.870
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.865
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.847
UBP1 Homo sapiens ENSG00000153560 D 0.846
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.846
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.843
ubp1 Oryzias latipes ENSORLG00000011706 I 0.842
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.829
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.827
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.827
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.826
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.826
UBP1 Bos taurus ENSBTAG00000003968 I 0.822
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.822
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.822
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.822
UBP1 Canis familiaris ENSCAFG00000004598 I 0.822
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.822
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.822
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.821
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.820
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.820
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.820
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.820
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.820
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.820
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.818
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.817
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.817
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.816
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.816
AAP78771 Xenopus laevis AAP78771 I 0.814
Ubp1 Mus musculus ENSMUSG00000009741 I 0.813
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.813
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.812
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.812
Tal_R012945 Tyto alba Tal_R012945 I 0.812
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.812
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.812
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.812
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.812
Aan_R001501 Calypte anna Aan_R001501 I 0.812
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.812
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.812
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.812
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.812
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.812
AAI06326 Xenopus laevis AAI06326 I 0.810
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.810
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.810
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.809
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.808
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.808
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.806
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.806
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.805
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.805
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.804
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.801
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.801
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.799
TFCP2 Sorex araneus ENSSARG00000002127 I 0.796
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.794
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.789
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.786
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.781
TFCP2 Homo sapiens ENSG00000135457 D 0.774
ubp1 Danio rerio ENSDARG00000018000 I 0.770
UBP1 Sorex araneus ENSSARG00000008670 I 0.768
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.767
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.764
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.764
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.763
ENSPSIG00000017477 Pelodiscus sinensis ENSPSIG00000017477 I 0.761
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.758
Tal_R010177 Tyto alba Tal_R010177 I 0.758
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.758
Aan_R009566 Calypte anna Aan_R009566 I 0.758
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.756
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.756
UBP1 Felis catus ENSFCAG00000006123 I 0.756
UBP1 Sus scrofa ENSSSCG00000011235 I 0.756
UBP1 Equus caballus ENSECAG00000018555 I 0.756
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.755
UBP1 Procavia capensis ENSPCAG00000008237 I 0.755
tfcp2 Danio rerio ENSDARG00000060306 I 0.754
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.750
UBP1 Echinops telfairi ENSETEG00000016510 I 0.750
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.749
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.749
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.749
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.748
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.748
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.746
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.744
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.744
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.744
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.744
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.744
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.744
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.744
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.744
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.744
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.744
TFCP2 Equus caballus ENSECAG00000020650 I 0.744
TFCP2 Felis catus ENSFCAG00000030292 I 0.744
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.744
TFCP2 Bos taurus ENSBTAG00000019312 I 0.744
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.744
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.744
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.743
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.743
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.742
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.742
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.741
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.741
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.739
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.739
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.739
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.738
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.738
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.737
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.737
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.732
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.732
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.728
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.728
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.728
UBP1 Taeniopygia guttata ENSTGUG00000001752 I 0.728
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.728
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.725
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.725
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.724
ENSGGOG00000025429 Gorilla gorilla ENSGGOG00000025429 I 0.724
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.724
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.723
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.721
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.721
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.721
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.721
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.720
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.720
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.720
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.720
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.720
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.720
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.720
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.720
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.720
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.719
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.719
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.719
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.718
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.718
Tal_R011103 Tyto alba Tal_R011103 I 0.718
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.718
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.718
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.718
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.718
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.718
Aan_R003641 Calypte anna Aan_R003641 I 0.718
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.718
TFCP2L1 Homo sapiens ENSG00000115112 D 0.718
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.716
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.716
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.715
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.715
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.714
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.714
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.714
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.713
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.712
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.710
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.708
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.708
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.708
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.707
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.706
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.705
ENSOANG00000031853 Ornithorhynchus anatinus ENSOANG00000031853 I 0.705
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.703