ENSLACG00000012609 (Latimeria chalumnae)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSLACG00000012609 T199041_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA

TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.905 0.905
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN

NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.870 0.870
UBP1
M10614_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.825 0.825
UBP1
M10615_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.825 0.825
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH

DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.825 0.825
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH

DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.802 0.802
TFCP2L1
M10609_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.802 0.802
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH

DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.822 0.822
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.793 0.793
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.793 0.793
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB

VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000014326 Grainyhead 81 262
ENSLACP00000014327 Grainyhead 77 267
ENSLACP00000014328 Grainyhead 91 264

Links

Other Grainyhead family TFs
Other Latimeria chalumnae TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.963
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.943
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.923
tfcp2 Danio rerio ENSDARG00000060306 I 0.923
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.923
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.919
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.917
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.917
TFCP2 Homo sapiens ENSG00000135457 D 0.916
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.911
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.911
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.911
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.911
TFCP2 Felis catus ENSFCAG00000030292 I 0.911
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.911
TFCP2 Equus caballus ENSECAG00000020650 I 0.911
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.911
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.911
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.911
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.911
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.911
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.911
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.911
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.911
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.911
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.905
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.905
Aan_R009566 Calypte anna Aan_R009566 I 0.905
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.905
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.905
TFCP2 Bos taurus ENSBTAG00000019312 I 0.905
Tal_R010177 Tyto alba Tal_R010177 I 0.905
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.905
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.899
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.899
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.899
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.888
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.880
UBP1 Homo sapiens ENSG00000153560 D 0.870
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.869
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.864
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.864
UBP1 Felis catus ENSFCAG00000006123 I 0.864
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.864
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.864
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.864
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.864
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.864
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.864
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.864
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.864
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.864
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.864
UBP1 Equus caballus ENSECAG00000018555 I 0.864
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.864
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.864
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.863
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.863
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.863
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.863
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.858
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.858
UBP1 Sorex araneus ENSSARG00000008670 I 0.858
UBP1 Bos taurus ENSBTAG00000003968 I 0.858
UBP1 Sus scrofa ENSSSCG00000011235 I 0.858
AAI06326 Xenopus laevis AAI06326 I 0.858
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.858
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.858
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.858
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.858
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.858
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.852
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.852
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.840
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.840
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.840
Tal_R012945 Tyto alba Tal_R012945 I 0.834
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.834
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.834
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.834
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.834
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.834
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.834
Aan_R001501 Calypte anna Aan_R001501 I 0.834
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.834
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.828
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.828
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.825
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.822
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.822
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.822
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.822
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.822
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.822
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.822
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.822
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.822
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.822
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.822
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.822
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.822
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.822
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.822
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.822
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.820
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.817
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.817
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.817
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.817
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.817
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.817
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.817
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.817
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.817
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.814
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.814
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.811
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.811
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.811
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.811
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.805
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.805
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.805
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.805
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.803
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.799
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.799
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.793
ubp1 Oryzias latipes ENSORLG00000011706 I 0.793
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.793
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.787
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.787
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.787
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.784
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.781
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.781
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.781
TFCP2L1 Homo sapiens ENSG00000115112 D 0.781
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.781
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.781
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.781
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.776
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.776
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.776
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.775
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.765
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.762
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.762
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.757
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.757
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.757
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.755
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.754
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.748
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.748
AAP78771 Xenopus laevis AAP78771 I 0.748
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.743
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.742
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.740
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.739
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.739
UBP1 Taeniopygia guttata ENSTGUG00000001752 I 0.734
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.734
ubp1 Danio rerio ENSDARG00000018000 I 0.732
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.730
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.728
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.728
Alligator_sinensis_CCG020804.1 Alligator sinensis Alligator_sinensis_CCG020804.1 N 0.722
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.721
UBP1 Canis familiaris ENSCAFG00000004598 I 0.721
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.721
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.719
ENSSHAG00000001157 Sarcophilus harrisii ENSSHAG00000001157 I 0.717
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.716
Ubp1 Mus musculus ENSMUSG00000009741 I 0.713
UBP1 Procavia capensis ENSPCAG00000008237 I 0.712
UBP1 Echinops telfairi ENSETEG00000016510 I 0.707
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.702