UBP1 (Loxodonta africana)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSLAFG00000029198 T199049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN

NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.705 0.705
UBP1
M10614_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.705 0.705
UBP1
M10615_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.705 0.705
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH

DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000025949 Grainyhead 64 249

Links

Other Grainyhead family TFs
Other Loxodonta africana TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.710
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.710
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.710
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.710
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.710
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.710
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.710
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.710
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.710
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.705
UBP1 Sorex araneus ENSSARG00000008670 I 0.705
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.705
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.705
UBP1 Homo sapiens ENSG00000153560 D 0.705
UBP1 Felis catus ENSFCAG00000006123 I 0.705
UBP1 Equus caballus ENSECAG00000018555 I 0.705
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.705
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.705