ubp1 (Oryzias latipes)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSORLG00000011706 T199159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.833 0.833
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.794 0.794
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.794 0.794
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.794 0.794
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.766 0.766
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.766 0.766
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.766 0.766
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.746 0.746
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.746 0.746
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.746 0.746
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014677 Grainyhead 43 258

Links

Other Grainyhead family TFs
Other Oryzias latipes TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.919
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.918
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.914
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.909
ENSSARG00000013877 Sorex araneus ENSSARG00000013877 I 0.899
ENSGGOG00000023919 Gorilla gorilla ENSGGOG00000023919 I 0.884
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.850
ubp1 Danio rerio ENSDARG00000018000 I 0.847
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.842
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.836
Tal_R010177 Tyto alba Tal_R010177 I 0.831
Aan_R009566 Calypte anna Aan_R009566 I 0.831
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.829
tfcp2 Danio rerio ENSDARG00000060306 I 0.829
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.829
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.829
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.828
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.828
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.826
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.826
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.825
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.825
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.823
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.822
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.822
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.821
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.820
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.820
TFCP2 Homo sapiens ENSG00000135457 D 0.820
TFCP2 Felis catus ENSFCAG00000030292 I 0.820
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.820
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.820
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.820
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.820
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.820
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.820
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.820
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.820
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.820
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.820
TFCP2 Equus caballus ENSECAG00000020650 I 0.820
TFCP2 Bos taurus ENSBTAG00000019312 I 0.820
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.820
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.820
ENSGGOG00000025429 Gorilla gorilla ENSGGOG00000025429 I 0.819
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.818
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.817
UBP1 Echinops telfairi ENSETEG00000016510 I 0.817
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.816
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.816
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.815
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.814
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.814
UBP1 Felis catus ENSFCAG00000006123 I 0.813
UBP1 Sus scrofa ENSSSCG00000011235 I 0.813
UBP1 Equus caballus ENSECAG00000018555 I 0.813
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.813
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.812
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.812
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.811
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.810
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.810
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.809
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.809
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.809
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.806
UBP1 Sorex araneus ENSSARG00000008670 I 0.804
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.804
UBP1 Procavia capensis ENSPCAG00000008237 I 0.803
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.803
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.800
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.800
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.798
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.798
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.798
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.798
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.797
TFCP2 Sorex araneus ENSSARG00000002127 I 0.796
TFCP2L1 Homo sapiens ENSG00000115112 D 0.794
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.794
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.794
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.794
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.794
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.794
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.794
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.794
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.793
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.793
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.793
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.792
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.792
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.792
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.791
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.791
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.791
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.790
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.789
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.789
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.789
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.788
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.788
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.787
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.787
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.786
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.786
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.786
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.786
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.785
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.785
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.785
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.784
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.784
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.783
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.783
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.783
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.782
Aan_R003641 Calypte anna Aan_R003641 I 0.782
Tal_R011103 Tyto alba Tal_R011103 I 0.782
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.782
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.781
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.778
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.777
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.777
AAP78771 Xenopus laevis AAP78771 I 0.776
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.776
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.773
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.773
AAI06326 Xenopus laevis AAI06326 I 0.773
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.772
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.772
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.772
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.772
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.771
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.770
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.770
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.770
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.769
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.767
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.766
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.762
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.762
ENSPSIG00000017477 Pelodiscus sinensis ENSPSIG00000017477 I 0.761
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.761
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.761
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.758
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.755
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.755
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.754
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.753
UBP1 Homo sapiens ENSG00000153560 D 0.750
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.748
Ubp1 Mus musculus ENSMUSG00000009741 I 0.746
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.745
UBP1 Bos taurus ENSBTAG00000003968 I 0.745
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.745
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.745
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.745
UBP1 Canis familiaris ENSCAFG00000004598 I 0.745
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.745
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.745
Tal_R012945 Tyto alba Tal_R012945 I 0.745
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.745
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.745
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.745
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.745
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.745
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.745
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.745
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.745
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.745
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.745
Aan_R001501 Calypte anna Aan_R001501 I 0.745
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.745
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.743
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.743
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.742
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.742
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.742
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.740
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.740
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.739
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.737
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.733
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.732
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.730
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.727
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.724
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.723
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.718
ENSMEUG00000009266 Macropus eugenii ENSMEUG00000009266 I 0.712
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.711
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.707
ENSOANG00000031853 Ornithorhynchus anatinus ENSOANG00000031853 I 0.705
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.703
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.703