tfcp2 (Oryzias latipes)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSORLG00000015644 T199162_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA

TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.925 0.925
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH

DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.798 0.798
TFCP2L1
M10609_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.794 0.794
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH

DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.794 0.794
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.776 0.776
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN

NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.779 0.779
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB

VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.779 0.779
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN

NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.775 0.775
UBP1
M10614_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.775 0.775
UBP1
M10615_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.775 0.775
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH

DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019583 Grainyhead 43 260
ENSORLP00000019587 Grainyhead 43 260
ENSORLP00000019590 Grainyhead 21 239
ENSORLP00000019591 Grainyhead 21 239

Links

Other Grainyhead family TFs
Other Oryzias latipes TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.967
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.963
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.962
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.962
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.962
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.958
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.953
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.944
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.943
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.942
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.938
tfcp2 Danio rerio ENSDARG00000060306 I 0.938
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.938
Tal_R010177 Tyto alba Tal_R010177 I 0.937
Aan_R009566 Calypte anna Aan_R009566 I 0.937
TFCP2 Homo sapiens ENSG00000135457 D 0.934
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.934
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.934
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.929
TFCP2 Bos taurus ENSBTAG00000019312 I 0.929
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.929
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.929
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.928
TFCP2 Felis catus ENSFCAG00000030292 I 0.925
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.925
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.925
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.925
TFCP2 Equus caballus ENSECAG00000020650 I 0.925
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.925
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.925
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.925
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.925
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.925
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.925
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.925
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.925
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.925
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.925
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.925
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.924
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.924
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.917
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.917
TFCP2 Echinops telfairi ENSETEG00000010787 I 0.914
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.914
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.914
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.910
ENSMGAG00000016919 Meleagris gallopavo ENSMGAG00000016919 I 0.887
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.879
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.874
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.870
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.870
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.869
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.867
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.865
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.864
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.864
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.858
UBP1 Equus caballus ENSECAG00000018555 I 0.856
UBP1 Felis catus ENSFCAG00000006123 I 0.856
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.856
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.851
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.850
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.848
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.848
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.845
UBP1 Sus scrofa ENSSSCG00000011235 I 0.845
AAP78771 Xenopus laevis AAP78771 I 0.843
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.843
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.842
UBP1 Procavia capensis ENSPCAG00000008237 I 0.841
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.841
UBP1 Echinops telfairi ENSETEG00000016510 I 0.841
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.840
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.840
AAI06326 Xenopus laevis AAI06326 I 0.839
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.838
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.837
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.836
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.836
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.835
UBP1 Sorex araneus ENSSARG00000008670 I 0.831
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.828
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.827
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.826
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.826
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.825
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.824
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.823
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.823
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.823
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.821
Tal_R011103 Tyto alba Tal_R011103 I 0.820
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.820
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.820
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.820
Aan_R003641 Calypte anna Aan_R003641 I 0.820
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.818
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.817
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.817
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.817
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.817
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.813
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.813
TFCP2L1 Homo sapiens ENSG00000115112 D 0.813
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.813
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.813
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.813
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.812
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.812
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.812
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.811
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.811
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.810
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.809
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.809
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.808
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.806
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.806
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.805
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.803
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.803
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.803
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.803
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.803
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.803
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.802
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.802
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.799
ubp1 Oryzias latipes ENSORLG00000011706 I 0.798
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.798
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.798
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.798
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.798
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.798
UBP1 Canis familiaris ENSCAFG00000004598 I 0.798
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.797
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.796
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.793
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.793
UBP1 Homo sapiens ENSG00000153560 D 0.793
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.793
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.789
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.789
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.789
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.789
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.788
Ubp1 Mus musculus ENSMUSG00000009741 I 0.785
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.785
ubp1 Danio rerio ENSDARG00000018000 I 0.785
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.784
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.784
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.780
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.780
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.779
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.779
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.777
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.776
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.776
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.775
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.775
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.775
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.775
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.775
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.775
UBP1 Bos taurus ENSBTAG00000003968 I 0.775
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.775
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.775
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.775
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.775
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.775
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.773
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.765
Tal_R012945 Tyto alba Tal_R012945 I 0.761
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.761
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.761
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.761
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.761
Aan_R001501 Calypte anna Aan_R001501 I 0.761
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.754
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.752
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.751
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.751
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.748
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.746
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.746
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.742
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.733
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.727
ENSSHAG00000000283 Sarcophilus harrisii ENSSHAG00000000283 I 0.718
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.714