Ubp1 (Rattus norvegicus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSRNOG00000009729 T199216_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.962 0.962
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.962 0.962
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.962 0.962
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.962 0.962
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.798 0.798
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.774 0.774
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.774 0.774
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.774 0.774
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.745 0.745
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.745 0.745
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.745 0.745
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.706 0.706
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.706 0.706
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.706 0.706
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.706 0.706
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.706 0.706
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.706 0.706
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.706 0.706
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.706 0.706
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.706 0.706
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000013050 Grainyhead 43 257

Links

Other Grainyhead family TFs
Other Rattus norvegicus TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.989
ENSGGOG00000023919 Gorilla gorilla ENSGGOG00000023919 I 0.986
Ubp1 Mus musculus ENSMUSG00000009741 I 0.981
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.971
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.971
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.966
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.966
UBP1 Canis familiaris ENSCAFG00000004598 I 0.966
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.966
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.966
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.966
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.966
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.966
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.966
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.966
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.966
UBP1 Bos taurus ENSBTAG00000003968 I 0.966
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.962
UBP1 Homo sapiens ENSG00000153560 D 0.962
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.962
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.962
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.962
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.951
ENSMICG00000010940 Microcebus murinus ENSMICG00000010940 I 0.950
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.947
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.938
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.928
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.928
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.928
Aan_R001501 Calypte anna Aan_R001501 I 0.928
Tal_R012945 Tyto alba Tal_R012945 I 0.928
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.928
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.928
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.923
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.912
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.909
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.905
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.904
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.904
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.904
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.904
UBP1 Felis catus ENSFCAG00000006123 I 0.900
UBP1 Equus caballus ENSECAG00000018555 I 0.900
UBP1 Sus scrofa ENSSSCG00000011235 I 0.900
UBP1 Sorex araneus ENSSARG00000008670 I 0.899
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.894
UBP1 Procavia capensis ENSPCAG00000008237 I 0.889
UBP1 Echinops telfairi ENSETEG00000016510 I 0.889
TFCP2 Sorex araneus ENSSARG00000002127 I 0.883
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.879
ENSMGAG00000005564 Meleagris gallopavo ENSMGAG00000005564 I 0.865
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.863
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.861
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.859
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.859
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.859
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.859
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.858
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.855
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.854
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.851
ENSMPUG00000000711 Mustela putorius furo ENSMPUG00000000711 I 0.850
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.847
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.846
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.846
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.846
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.846
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.845
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.843
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.843
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.841
TFCP2 Homo sapiens ENSG00000135457 D 0.839
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.834
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.833
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.832
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.829
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.827
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.827
AAP78771 Xenopus laevis AAP78771 I 0.824
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.824
UBP1 Taeniopygia guttata ENSTGUG00000001752 I 0.822
AAI06326 Xenopus laevis AAI06326 I 0.820
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.819
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.816
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.812
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.808
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.807
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.803
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.803
Aan_R009566 Calypte anna Aan_R009566 I 0.802
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.802
Tal_R010177 Tyto alba Tal_R010177 I 0.802
ENSP00000263707 Macaca fascicularis ENSP00000263707 I 0.801
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.798
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.798
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.798
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.798
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.795
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.793
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.791
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.791
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.791
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.791
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.791
TFCP2 Bos taurus ENSBTAG00000019312 I 0.791
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.791
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.791
TFCP2 Felis catus ENSFCAG00000030292 I 0.791
TFCP2 Equus caballus ENSECAG00000020650 I 0.791
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.791
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.791
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.791
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.791
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.790
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.788
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.787
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.787
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.787
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.787
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.782
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.782
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.782
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.782
tfcp2 Danio rerio ENSDARG00000060306 I 0.782
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.782
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.781
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.779
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.776
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.775
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.774
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.774
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.774
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.773
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.773
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.770
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.770
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.770
TFCP2L1 Homo sapiens ENSG00000115112 D 0.770
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.770
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.769
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.769
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.769
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.768
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.767
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.767
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.766
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.765
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.764
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.761
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.761
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.760
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.758
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.758
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.757
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.756
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.755
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.754
Tal_R011103 Tyto alba Tal_R011103 I 0.752
Aan_R003641 Calypte anna Aan_R003641 I 0.752
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.752
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.752
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.752
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.751
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.750
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.750
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.750
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.750
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.749
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.748
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.746
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.745
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.745
ubp1 Oryzias latipes ENSORLG00000011706 I 0.745
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.745
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.745
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.745
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.742
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.742
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.740
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.738
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.734
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.733
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.727
ubp1 Danio rerio ENSDARG00000018000 I 0.727
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.716