grhl1 (Tetraodon nigroviridis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSTNIG00000017317 T199268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL1
M03071_2.00
Homo sapiens
RACYKGWHNDWCMGGTT

AACCKGWHNDWCMRGTY
SELEX
Jolma et al.(2013)
GRHL1_1
0.775 0.775
GRHL1
M03072_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Jolma et al.(2013)
GRHL1_2
0.775 0.775
GRHL1
M03073_2.00
Homo sapiens
HWAACCGGTTTD

HAAACCGGTTWD
SELEX
Jolma et al.(2013)
GRHL1_3
0.775 0.775
GRHL1
M04887_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX
0.775 0.775
GRHL1
M04888_2.00
Homo sapiens
DAACMKGTTH

DAACMKGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX
0.775 0.775
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.757 0.757
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.757 0.757
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.757 0.757
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020455 Grainyhead 220 437

Links

Other Grainyhead family TFs
Other Tetraodon nigroviridis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
grhl1 Danio rerio ENSDARG00000061391 I 0.956
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.936
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.927
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.892
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.881
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.876
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.872
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.862
grhl1 Oryzias latipes ENSORLG00000015232 I 0.839
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.804
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.803
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.803
XP_002938935 Xenopus tropicalis XP_002938935 I 0.802
grhl1.L Xenopus laevis XB-GENE-486580 I 0.802
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.798
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.798
ENSAMXG00000017898 Astyanax mexicanus ENSAMXG00000017898 N 0.795
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.793
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.792
Grhl1 Mus musculus ENSMUSG00000020656 I 0.791
GRHL1 Equus caballus ENSECAG00000015969 I 0.789
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.789
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.789
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.789
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.789
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.789
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.789
GRHL1 Anolis carolinensis ENSACAG00000000132 I 0.786
XP_002938936 Xenopus tropicalis XP_002938936 I 0.784
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.782
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.780
GRHL1 Felis catus ENSFCAG00000007856 I 0.780
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.780
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.780
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.780
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.780
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.780
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.780
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.780
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.776
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.775
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.775
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.775
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.775
GRHL1 Bos taurus ENSBTAG00000007485 I 0.775
GRHL1 Homo sapiens ENSG00000134317 D 0.775
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.775
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.774
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.771
Tal_R012680 Tyto alba Tal_R012680 I 0.771
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.771
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.771
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.771
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.771
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.771
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.771
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.766
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.761
Aan_R015393 Calypte anna Aan_R015393 I 0.761
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.761
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.757
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.757
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.757
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.757
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.757
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.757
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.757
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.757
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.757
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.757
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.757
GRHL2 Homo sapiens ENSG00000083307 D 0.757
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.752
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.752
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.752
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.752
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.752
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.752
GRHL2 Cavia porcellus ENSCPOG00000005630 I 0.750
GRHL2 Felis catus ENSFCAG00000004963 I 0.748
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.748
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.748
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.748
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.748
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.748
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.748
GRHL2 Bos taurus ENSBTAG00000004518 I 0.748
grhl2b Danio rerio ENSDARG00000061974 I 0.748
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.743
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.743
GRHL2 Monodelphis domestica ENSMODG00000006048 I 0.743
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I 0.742
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.740
Brh_R013325 Buceros rhinoceros Brh_R013325 I 0.739
Grhl2 Mus musculus ENSMUSG00000022286 D 0.739
Aan_R003923 Calypte anna Aan_R003923 I 0.739
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I 0.739
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.739
Afo_R002230 Aptenodytes forsteri Afo_R002230 I 0.739
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.737
ENSP00000379261 Macaca fascicularis ENSP00000379261 I 0.732
GRHL2 Macaca mulatta ENSMMUG00000020995 I 0.732
GRHL2 Anolis carolinensis ENSACAG00000008759 I 0.730
Gfo_R006019 Geospiza fortis Gfo_R006019 I 0.729
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I 0.729
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.725
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.724
GRHL2 Equus caballus ENSECAG00000013681 I 0.724
ENSLOCG00000009655 Lepisosteus oculatus ENSLOCG00000009655 I 0.722
grhl2a Danio rerio ENSDARG00000058342 I 0.720
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I 0.717
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.716
ENSXMAG00000003725 Xiphophorus maculatus ENSXMAG00000003725 I 0.703
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I 0.703
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I 0.702