Cmyd_10003336 (Chelonia mydas)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Cmyd_10003336 T199513_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.898 0.898
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.898 0.898
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.898 0.898
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.898 0.898
GRHL1
M03071_2.00
Homo sapiens
RACYKGWHNDWCMGGTT

AACCKGWHNDWCMRGTY
SELEX
Jolma et al.(2013)
GRHL1_1
0.777 0.777
GRHL1
M03072_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Jolma et al.(2013)
GRHL1_2
0.777 0.777
GRHL1
M03073_2.00
Homo sapiens
HWAACCGGTTTD

HAAACCGGTTWD
SELEX
Jolma et al.(2013)
GRHL1_3
0.777 0.777
GRHL1
M04887_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX
0.777 0.777
GRHL1
M04888_2.00
Homo sapiens
DAACMKGTTH

DAACMKGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX
0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10003336 Grainyhead 282 438

Links

Other Grainyhead family TFs
Other Chelonia mydas TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R015393 Calypte anna Aan_R015393 I 0.783
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.766
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I 0.828
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.892
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.898
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I 0.712
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.873
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.809
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.898
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.898
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.841
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.803
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.898
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.854
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N 0.732
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I 0.878
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.911
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.777
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.796
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.878
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.725
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.796
GRHL1 Homo sapiens ENSG00000134317 D 0.777
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.796
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.803
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.771
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.777
grhl1 Danio rerio ENSDARG00000061391 I 0.890
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.783
grhl1.L Xenopus laevis XB-GENE-486580 I 0.764
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.898
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.898
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.898
Grhl2 Mus musculus ENSMUSG00000022286 D 0.783
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.892
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.892
GRHL2 Homo sapiens ENSG00000083307 D 0.898
grhl2a Takifugu rubripes ENSTRUG00000011936 N 0.732
grhl2a Gasterosteus aculeatus ENSGACG00000003655 I 0.745
grhl2a Oryzias latipes ENSORLG00000002613 N 0.758
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.834
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.783
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.898
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I 0.709
SNAPOd2T00016626001 Oikopleura dioica SNAPOd2T00016626001 I 0.700
XP_002938936 Xenopus tropicalis XP_002938936 I 0.764