Gfo_R006019 (Geospiza fortis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Gfo_R006019 T199536_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.899 0.899
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.899 0.899
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.899 0.899
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.899 0.899
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006019 Grainyhead 217 434

Links

Other Grainyhead family TFs
Other Geospiza fortis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.908
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.904
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.904
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I 0.901
Aan_R003923 Calypte anna Aan_R003923 I 0.901
Brh_R013325 Buceros rhinoceros Brh_R013325 I 0.901
Afo_R002230 Aptenodytes forsteri Afo_R002230 I 0.901
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.899
Grhl2 Mus musculus ENSMUSG00000022286 D 0.899
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.899
GRHL2 Homo sapiens ENSG00000083307 D 0.899
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.899
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.899
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.899
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.899
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.899
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.899
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.899
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.899
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.899
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.894
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.894
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.894
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.894
GRHL2 Cavia porcellus ENSCPOG00000005630 I 0.891
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.890
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.888
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I 0.887
GRHL2 Monodelphis domestica ENSMODG00000006048 I 0.887
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.885
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.885
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.885
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.885
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.885
GRHL2 Bos taurus ENSBTAG00000004518 I 0.885
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.885
GRHL2 Felis catus ENSFCAG00000004963 I 0.885
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.885
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.881
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.879
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.876
ENSP00000379261 Macaca fascicularis ENSP00000379261 I 0.866
GRHL2 Macaca mulatta ENSMMUG00000020995 I 0.866
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.862
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.858
GRHL2 Equus caballus ENSECAG00000013681 I 0.858
GRHL2 Anolis carolinensis ENSACAG00000008759 I 0.847
grhl2b Danio rerio ENSDARG00000061974 I 0.844
ENSLOCG00000009655 Lepisosteus oculatus ENSLOCG00000009655 I 0.830
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.817
GRHL2 Erinaceus europaeus ENSEEUG00000015263 I 0.807
ENSXMAG00000003725 Xiphophorus maculatus ENSXMAG00000003725 I 0.807
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.794
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I 0.788
grhl2b Gasterosteus aculeatus ENSGACG00000003695 I 0.784
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.784
Ogr11913 Ophisaurus gracilis Ogr11913 I 0.781
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.766
grhl2b Tetraodon nigroviridis ENSTNIG00000009151 I 0.763
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I 0.761
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.743
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.743
grhl2a Danio rerio ENSDARG00000058342 I 0.743
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.743
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.742
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.739
grhl1 Oryzias latipes ENSORLG00000015232 I 0.739
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I 0.738
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.729
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I 0.729
grhl1 Danio rerio ENSDARG00000061391 I 0.725
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.723
grhl1.L Xenopus laevis XB-GENE-486580 I 0.722
XP_002938935 Xenopus tropicalis XP_002938935 I 0.722
GRHL1 Equus caballus ENSECAG00000015969 I 0.718
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.718
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.718
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.718
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.714
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.714
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.714
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.714
Grhl1 Mus musculus ENSMUSG00000020656 I 0.712
Aan_R015393 Calypte anna Aan_R015393 I 0.711
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.711
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.711
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.711
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.711
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.711
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.711
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.711
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.711
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.711
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.711
Tal_R012680 Tyto alba Tal_R012680 I 0.711
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.708
ENSAMXG00000016712 Astyanax mexicanus ENSAMXG00000016712 I 0.707
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.706
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.706
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.706
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.706
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.706
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.706
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.706
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.706
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.702
GRHL1 Homo sapiens ENSG00000134317 D 0.702
SNAPOd2T00016626001 Oikopleura dioica SNAPOd2T00016626001 I 0.700