Tal_R009556 (Tyto alba)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Tal_R009556 T199564_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
1.000 1.000
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
1.000 1.000
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
1.000 1.000
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
1.000 1.000
GRHL1
M03071_2.00
Homo sapiens
RACYKGWHNDWCMGGTT

AACCKGWHNDWCMRGTY
SELEX
Jolma et al.(2013)
GRHL1_1
0.837 0.837
GRHL1
M03072_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Jolma et al.(2013)
GRHL1_2
0.837 0.837
GRHL1
M03073_2.00
Homo sapiens
HWAACCGGTTTD

HAAACCGGTTWD
SELEX
Jolma et al.(2013)
GRHL1_3
0.837 0.837
GRHL1
M04887_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX
0.837 0.837
GRHL1
M04888_2.00
Homo sapiens
DAACMKGTTH

DAACMKGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX
0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R009556 Grainyhead 1 49

Links

Other Grainyhead family TFs
Other Tyto alba TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRHL2 Homo sapiens ENSG00000083307 D 1.000
GRHL1 Homo sapiens ENSG00000134317 D 0.837
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I 0.959
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.898
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.878
GRHL2 Pan troglodytes ENSPTRG00000020479 I 1.000
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.857
ENSTGUG00000014574 Taeniopygia guttata ENSTGUG00000014574 I 1.000
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.918
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.898
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.857
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 1.000
SNAPOd2T00016626001 Oikopleura dioica SNAPOd2T00016626001 I 0.700
grhl1.L Xenopus laevis XB-GENE-486580 I 0.837
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 1.000
XP_002938936 Xenopus tropicalis XP_002938936 I 0.837
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.918
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 1.000
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 1.000
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 1.000
grhl2a Gasterosteus aculeatus ENSGACG00000003655 I 0.755
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.939
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 1.000
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 1.000
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.857
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 1.000
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.837
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.878
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N 0.714
grhl2a Oryzias latipes ENSORLG00000002613 N 0.776